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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100555
AERA01022797
655530
Betaproteobacteria
GGT
Thr
>WENV170000197
AERA01022797
655530
Betaproteobacteria
GGT
Thr
>WENV11100521
AERA01018707
454902
Betaproteobacteria
CGC
Ala
>WENV170000163
AERA01018707
454902
Betaproteobacteria
CGC
Ala
>WENV11100514
AERA01018188
455720
Betaproteobacteria
TGC
Ala
>WENV11100616
AERA01035706
455720
Betaproteobacteria
TGC
Ala
>WENV170000156
AERA01018188
455720
Betaproteobacteria
TGC
Ala
>WENV170000258
AERA01035706
455720
Betaproteobacteria
TGC
Ala
>WENV11100380
AERA01001055
288758
Betaproteobacteria
TTG
Gln
>WENV170000022
AERA01001055
288758
Betaproteobacteria
TTG
Gln
>WENV11100507
AERA01017287
179980
Betaproteobacteria
GTA
Tyr
>WENV170000149
AERA01017287
179980
Betaproteobacteria
GTA
Tyr
>WENV11100607
AERA01034584
180620
Betaproteobacteria
GAG
Leu
>WENV170000249
AERA01034584
180620
Betaproteobacteria
GAG
Leu
>WENV170000191
AERA01022246
274221
Betaproteobacteria
TGG
Pro
>WENV11100549
AERA01022246
274221
Betaproteobacteria
TGG
Pro
>WENV11100585
AERA01027920
780436
Betaproteobacteria
GCA
Cys
>WENV170000227
AERA01027920
780436
Betaproteobacteria
GCA
Cys
>WENV11100532
AERA01019508
274554
Betaproteobacteria
TTG
Gln
>WENV170000174
AERA01019508
274554
Betaproteobacteria
TTG
Gln
>WENV170000153
AERA01017695
660968
Betaproteobacteria
CAC
Val
>WENV11100511
AERA01017695
660968
Betaproteobacteria
CAC
Val
>WENV170000161
AERA01018516
455351
Betaproteobacteria
TAC
Val
>WENV11100519
AERA01018516
455351
Betaproteobacteria
TAC
Val
>WENV11100558
AERA01023750
274556
Betaproteobacteria
TCT
Arg
>WENV170000200
AERA01023750
274556
Betaproteobacteria
TCT
Arg
>WENV11100425
AERA01005011
274553
Betaproteobacteria
CAT
Met
>WENV170000067
AERA01005011
274553
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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