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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100535
AERA01020277
112698
Gammaproteobacteria
CAA
Leu
>WENV170000177
AERA01020277
112698
Gammaproteobacteria
CAA
Leu
>WENV11100590
AERA01030868
270905
Gammaproteobacteria
CCG
Arg
>WENV170000232
AERA01030868
270905
Gammaproteobacteria
CCG
Arg
>WENV11100560
AERA01024097
472378
Gammaproteobacteria
CGC
Ala
>WENV170000202
AERA01024097
472378
Gammaproteobacteria
CGC
Ala
>WENV11100409
AERA01003563
454110
Gammaproteobacteria
GGT
Thr
>WENV170000051
AERA01003563
454110
Gammaproteobacteria
GGT
Thr
>WENV11100423
AERA01004508
451869
Gammaproteobacteria
GGT
Thr
>WENV170000065
AERA01004508
451869
Gammaproteobacteria
GGT
Thr
>WENV11100582
AERA01027801
451876
Gammaproteobacteria
GTG
His
>WENV170000224
AERA01027801
451876
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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