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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170009293
APMI01000040
454119
Betaproteobacteria
CGC
Ala
>WENV170009295
APMI01000040
780573
Betaproteobacteria
TCC
Gly
>WENV170009332
APMI01000098
472341
Betaproteobacteria
GCC
Gly
>WENV170009334
APMI01000098
472341
Betaproteobacteria
GCC
Gly
>WENV170009496
APMI01000423
282056
Betaproteobacteria
CAT
Met
>WENV170009517
APMI01000545
282068
Betaproteobacteria
TTG
Gln
>WENV170009600
APMI01000827
282068
Betaproteobacteria
TTG
Gln
>WENV170009734
APMI01002324
180620
Betaproteobacteria
GAG
Leu
>WENV170009752
APMI01002524
294180
Betaproteobacteria
GAT
Ile
>WENV170009834
APMI01003669
655629
Betaproteobacteria
CAC
Val
>WENV170009964
APMI01005971
455351
Betaproteobacteria
TAC
Val
>WENV170010154
APMI01009839
457606
Betaproteobacteria
TTT
Lys
>WENV170010156
APMI01009859
452595
Betaproteobacteria
GTT
Asn
>WENV170010534
APMI01019694
288758
Betaproteobacteria
TTG
Gln
>WENV170010609
APMI01022452
457606
Betaproteobacteria
TTT
Lys
>WENV170010620
APMI01022854
780573
Betaproteobacteria
TCC
Gly
>WENV170010639
APMI01023364
273219
Betaproteobacteria
TCT
Arg
>WENV170010664
APMI01024510
465080
Betaproteobacteria
GGC
Ala
>WENV170010673
APMI01024702
454252
Betaproteobacteria
CGC
Ala
>WENV170010693
APMI01025490
454252
Betaproteobacteria
CGC
Ala
>WENV170010739
APMI01027024
477700
Betaproteobacteria
GCC
Gly
>WENV170010838
APMI01030984
45973
Betaproteobacteria
CGA
Ser
>WENV170010874
APMI01032665
184758
Betaproteobacteria
CAG
Leu
>WENV170010899
APMI01034158
276754
Betaproteobacteria
CAT
Met
>WENV170010917
APMI01035089
477700
Betaproteobacteria
GCC
Gly
>WENV170010919
APMI01035089
477700
Betaproteobacteria
GCC
Gly
>WENV170010921
APMI01035108
780573
Betaproteobacteria
TCC
Gly
>WENV170010924
APMI01035110
780573
Betaproteobacteria
TCC
Gly
>WENV170010995
APMI01038429
660968
Betaproteobacteria
CAC
Val
>WENV170011185
APMI01048465
454227
Betaproteobacteria
GTG
His
>WENV170011237
APMI01051627
282056
Betaproteobacteria
CAT
Met
>WENV170011265
APMI01053306
454227
Betaproteobacteria
GTG
His
>WENV170011305
APMI01054786
154091
Betaproteobacteria
GTA
Tyr
>WENV170011317
APMI01055651
465080
Betaproteobacteria
GGC
Ala
>WENV170011427
APMI01065134
180620
Betaproteobacteria
GAG
Leu
>WENV170011431
APMI01065244
180620
Betaproteobacteria
GAG
Leu
>WENV170011501
APMI01069992
780579
Betaproteobacteria
GCA
Cys
>WENV170011552
APMI01073770
89670
Betaproteobacteria
TGA
Ser
>WENV170011593
APMI01076121
457359
Betaproteobacteria
TTT
Lys
>WENV170011637
APMI01078808
454245
Betaproteobacteria
CTT
Lys
>WENV170011676
APMI01081498
465080
Betaproteobacteria
GGC
Ala
>WENV170011736
APMI01086681
112692
Betaproteobacteria
TAG
Leu
>WENV170011749
APMI01087590
276754
Betaproteobacteria
CAT
Met
>WENV170011837
APMI01094992
282068
Betaproteobacteria
TTG
Gln
>WENV170011840
APMI01095826
30774
Betaproteobacteria
GGA
Ser
>WENV170011863
APMI01097525
458121
Betaproteobacteria
GCC
Gly
>WENV170011879
APMI01098647
273217
Betaproteobacteria
ACG
Arg
>WENV170012132
APMI01124243
786138
Betaproteobacteria
CCC
Gly
>WENV170012279
APMI01145673
477700
Betaproteobacteria
GCC
Gly
>WENV170012288
APMI01147007
283585
Betaproteobacteria
CAT
Met
>WENV170012405
APMI01169571
457604
Betaproteobacteria
CGT
Thr
>WENV170012412
APMI01170810
472411
Betaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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