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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170009813
APMI01003351
456952
Gammaproteobacteria
CGC
Ala
>WENV170010461
APMI01017652
456952
Gammaproteobacteria
CGC
Ala
>WENV170011488
APMI01069096
456952
Gammaproteobacteria
CGC
Ala
>WENV170010056
APMI01007540
780156
Gammaproteobacteria
CCC
Gly
>WENV170010369
APMI01015144
780156
Gammaproteobacteria
CCC
Gly
>WENV170010315
APMI01013450
655119
Gammaproteobacteria
CAC
Val
>WENV170010484
APMI01018330
655119
Gammaproteobacteria
CAC
Val
>WENV170010485
APMI01018331
655119
Gammaproteobacteria
CAC
Val
>WENV170010593
APMI01021759
655119
Gammaproteobacteria
CAC
Val
>WENV170009693
APMI01001900
472378
Gammaproteobacteria
CGC
Ala
>WENV170010124
APMI01009213
472378
Gammaproteobacteria
CGC
Ala
>WENV170010742
APMI01027066
47108
Gammaproteobacteria
TGA
Ser
>WENV170012274
APMI01145079
780592
Gammaproteobacteria
CCC
Gly
>WENV170009673
APMI01001568
275934
Gammaproteobacteria
GGG
Pro
>WENV170010440
APMI01017113
112698
Gammaproteobacteria
CAA
Leu
>WENV170011182
APMI01048208
112698
Gammaproteobacteria
CAA
Leu
>WENV170009883
APMI01004467
655007
Gammaproteobacteria
CTG
Gln
>WENV170010814
APMI01029940
655007
Gammaproteobacteria
CTG
Gln
>WENV170011538
APMI01072772
655007
Gammaproteobacteria
CTG
Gln
>WENV170009848
APMI01003864
282238
Gammaproteobacteria
TCT
Arg
>WENV170010377
APMI01015377
282238
Gammaproteobacteria
TCT
Arg
>WENV170010433
APMI01017069
282238
Gammaproteobacteria
TCT
Arg
>WENV170009393
APMI01000159
779439
Gammaproteobacteria
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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