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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014363
AYRF01000231
273698
Gammaproteobacteria
CCG
Arg
>WENV170014372
AYRF01002886
454808
Gammaproteobacteria
CAT
Met
>WENV170014373
AYRF01003518
779470
Gammaproteobacteria
GCA
Cys
>WENV170014374
AYRF01005109
180464
Gammaproteobacteria
GAG
Leu
>WENV170014380
AYRF01007983
273703
Gammaproteobacteria
TCT
Arg
>WENV170014381
AYRF01010193
274986
Gammaproteobacteria
CAT
Met
>WENV170014390
AYRF01019065
30510
Gammaproteobacteria
GGA
Ser
>WENV170014398
AYRF01022264
452413
Gammaproteobacteria
GGC
Ala
>WENV170014400
AYRF01022838
46215
Gammaproteobacteria
GCT
Ser
>WENV170014410
AYRF01039300
273695
Gammaproteobacteria
GGT
Thr
>WENV170014414
AYRF01041983
464809
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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