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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014527
AYRH01001012
780486
Alphaproteobacteria
TCC
Gly
>WENV170014578
AYRH01016871
653534
Alphaproteobacteria
GCC
Gly
>WENV170014518
AYRH01000282
452629
Alphaproteobacteria
GAA
Phe
>WENV170014545
AYRH01003751
656063
Alphaproteobacteria
GAC
Val
>WENV170014593
AYRH01026213
654987
Alphaproteobacteria
GAC
Val
>WENV170014539
AYRH01001944
297864
Alphaproteobacteria
GTC
Asp
>WENV170014588
AYRH01022794
218137
Alphaproteobacteria
TAG
Leu
>WENV170014568
AYRH01011804
46034
Alphaproteobacteria
CGA
Ser
>WENV170014590
AYRH01023448
654103
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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