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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014701
AYSL01005863
452599
Gammaproteobacteria
TAC
Val
>WENV170014718
AYSL01006707
452599
Gammaproteobacteria
TAC
Val
>WENV170014761
AYSL01009560
452599
Gammaproteobacteria
TAC
Val
>WENV170014657
AYSL01003156
656944
Gammaproteobacteria
CCT
Arg
>WENV170014714
AYSL01006398
656944
Gammaproteobacteria
CCT
Arg
>WENV170014653
AYSL01002917
453181
Gammaproteobacteria
GTG
His
>WENV170014724
AYSL01007324
453181
Gammaproteobacteria
GTG
His
>WENV170014630
AYSL01001568
452598
Gammaproteobacteria
GTG
His
>WENV170014686
AYSL01005110
452605
Gammaproteobacteria
GGC
Ala
>WENV170014665
AYSL01003440
779641
Gammaproteobacteria
TCC
Gly
>WENV170014721
AYSL01006960
276974
Gammaproteobacteria
GGG
Pro
>WENV170014746
AYSL01008851
458351
Gammaproteobacteria
TTG
Gln
>WENV170014672
AYSL01003990
276971
Gammaproteobacteria
ACG
Arg
>WENV170014671
AYSL01003990
276971
Gammaproteobacteria
ACG
Arg
>WENV170014691
AYSL01005283
455405
Gammaproteobacteria
GGT
Thr
>WENV170014662
AYSL01003409
276976
Gammaproteobacteria
TCT
Arg
>WENV170014652
AYSL01002917
276976
Gammaproteobacteria
TCT
Arg
>WENV170014627
AYSL01001493
271617
Gammaproteobacteria
GGG
Pro
>WENV170014610
AYSL01000572
46525
Gammaproteobacteria
GCT
Ser
>WENV170014655
AYSL01003028
46525
Gammaproteobacteria
GCT
Ser
>WENV170014606
AYSL01000243
653944
Gammaproteobacteria
GCC
Gly
>WENV170014622
AYSL01001364
653944
Gammaproteobacteria
GCC
Gly
>WENV170014616
AYSL01001157
452597
Gammaproteobacteria
TTG
Gln
>WENV170014617
AYSL01001157
452597
Gammaproteobacteria
TTG
Gln
>WENV170014618
AYSL01001183
452597
Gammaproteobacteria
TTG
Gln
>WENV170014621
AYSL01001332
452597
Gammaproteobacteria
TTG
Gln
>WENV170014773
AYSL01010527
452597
Gammaproteobacteria
TTG
Gln
>WENV170014628
AYSL01001568
271611
Gammaproteobacteria
TGG
Pro
>WENV170014677
AYSL01004382
276973
Gammaproteobacteria
GAC
Val
>WENV170014646
AYSL01002324
276973
Gammaproteobacteria
GAC
Val
>WENV170014641
AYSL01002105
276973
Gammaproteobacteria
GAC
Val
>WENV170014669
AYSL01003909
271287
Gammaproteobacteria
CAT
Met
>WENV170014755
AYSL01009362
271610
Gammaproteobacteria
ACG
Arg
>WENV170014642
AYSL01002181
271610
Gammaproteobacteria
ACG
Arg
>WENV170014625
AYSL01001435
458352
Gammaproteobacteria
TTG
Gln
>WENV170014777
AYSL01010788
113737
Gammaproteobacteria
CAA
Leu
>WENV170014752
AYSL01009061
781121
Gammaproteobacteria
GCA
Cys
>WENV170014680
AYSL01004808
781121
Gammaproteobacteria
GCA
Cys
>WENV170014649
AYSL01002494
273754
Gammaproteobacteria
GTT
Asn
>WENV170014650
AYSL01002494
273754
Gammaproteobacteria
GTT
Asn
>WENV170014644
AYSL01002269
452604
Gammaproteobacteria
TTC
Glu
>WENV170014645
AYSL01002271
452604
Gammaproteobacteria
TTC
Glu
>WENV170014713
AYSL01006177
452604
Gammaproteobacteria
TTC
Glu
>WENV170014774
AYSL01010647
113485
Gammaproteobacteria
CAA
Leu
>WENV170014663
AYSL01003440
452607
Gammaproteobacteria
TGT
Thr
>WENV170014700
AYSL01005798
271616
Gammaproteobacteria
CAT
Met
>WENV170014639
AYSL01002090
781219
Gammaproteobacteria
GCA
Cys
>WENV170014764
AYSL01009694
781219
Gammaproteobacteria
GCA
Cys
>WENV170014702
AYSL01005863
271613
Gammaproteobacteria
GTC
Asp
>WENV170014719
AYSL01006707
271613
Gammaproteobacteria
GTC
Asp
>WENV170014762
AYSL01009560
271613
Gammaproteobacteria
GTC
Asp
>WENV170014729
AYSL01007558
452603
Gammaproteobacteria
CCA
Trp
>WENV170014664
AYSL01003440
218041
Gammaproteobacteria
GTA
Tyr
>WENV170014620
AYSL01001323
276972
Gammaproteobacteria
CCA
Trp
>WENV170014632
AYSL01001730
271286
Gammaproteobacteria
CAT
Met
>WENV170014744
AYSL01008713
271286
Gammaproteobacteria
CAT
Met
>WENV170014757
AYSL01009422
271286
Gammaproteobacteria
CAT
Met
>WENV170014624
AYSL01001435
181084
Gammaproteobacteria
TAG
Leu
>WENV170014626
AYSL01001435
181084
Gammaproteobacteria
TAG
Leu
>WENV170014633
AYSL01001730
181084
Gammaproteobacteria
TAG
Leu
>WENV170014654
AYSL01002917
181084
Gammaproteobacteria
TAG
Leu
>WENV170014725
AYSL01007324
181084
Gammaproteobacteria
TAG
Leu
>WENV170014769
AYSL01010149
181084
Gammaproteobacteria
TAG
Leu
>WENV170014740
AYSL01008379
276970
Gammaproteobacteria
CCG
Arg
>WENV170014703
AYSL01005909
276970
Gammaproteobacteria
CCG
Arg
>WENV170014658
AYSL01003325
276970
Gammaproteobacteria
CCG
Arg
>WENV170014770
AYSL01010149
276975
Gammaproteobacteria
TGG
Pro
>WENV170014763
AYSL01009575
276975
Gammaproteobacteria
TGG
Pro
>WENV170014726
AYSL01007324
276975
Gammaproteobacteria
TGG
Pro
>WENV170014651
AYSL01002917
276975
Gammaproteobacteria
TGG
Pro
>WENV170014661
AYSL01003409
276975
Gammaproteobacteria
TGG
Pro
>WENV170014666
AYSL01003440
655603
Gammaproteobacteria
GGT
Thr
>WENV170014711
AYSL01006143
452600
Gammaproteobacteria
GTT
Asn
>WENV170014760
AYSL01009560
452600
Gammaproteobacteria
GTT
Asn
>WENV170014623
AYSL01001385
30792
Gammaproteobacteria
GGA
Ser
>WENV170014643
AYSL01002191
291681
Gammaproteobacteria
GAT
Ile
>WENV170014670
AYSL01003990
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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