This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015946
AZIJ01005198
664335
Alphaproteobacteria
TTC
Glu
>WENV170016202
AZIJ01016102
180489
Alphaproteobacteria
TAG
Leu
>WENV170016005
AZIJ01007460
452917
Alphaproteobacteria
TAC
Val
>WENV170016187
AZIJ01015206
655167
Alphaproteobacteria
TTC
Glu
>WENV170016040
AZIJ01009542
45799
Alphaproteobacteria
GCT
Ser
>WENV170016018
AZIJ01008240
112803
Alphaproteobacteria
CAG
Leu
>WENV170016191
AZIJ01015381
46237
Alphaproteobacteria
TGA
Ser
>WENV170016088
AZIJ01012390
46035
Alphaproteobacteria
GGA
Ser
>WENV170015851
AZIJ01001498
655171
Alphaproteobacteria
GGT
Thr
>WENV170016084
AZIJ01012194
655171
Alphaproteobacteria
GGT
Thr
>WENV170016215
AZIJ01017211
454623
Alphaproteobacteria
TAC
Val
>WENV170016105
AZIJ01012708
297572
Alphaproteobacteria
GTG
His
>WENV170015931
AZIJ01004592
454054
Alphaproteobacteria
TGC
Ala
>WENV170016075
AZIJ01011748
454054
Alphaproteobacteria
TGC
Ala
>WENV170015862
AZIJ01001967
653532
Alphaproteobacteria
GTT
Asn
>WENV170016009
AZIJ01007603
653532
Alphaproteobacteria
GTT
Asn
>WENV170016219
AZIJ01017364
655566
Alphaproteobacteria
GAC
Val
>WENV170016259
AZIJ01018620
113188
Alphaproteobacteria
GAG
Leu
>WENV170015866
AZIJ01002407
456892
Alphaproteobacteria
CGC
Ala
>WENV170016196
AZIJ01015708
275157
Alphaproteobacteria
TGG
Pro
>WENV170016251
AZIJ01018354
274133
Alphaproteobacteria
ACG
Arg
>WENV170016121
AZIJ01013084
454912
Alphaproteobacteria
GGC
Ala
>WENV170016004
AZIJ01007460
671670
Alphaproteobacteria
CAC
Val
>WENV170015863
AZIJ01002038
31090
Alphaproteobacteria
GGA
Ser
>WENV170016260
AZIJ01018651
275152
Alphaproteobacteria
TCT
Arg
>WENV170015865
AZIJ01002305
46034
Alphaproteobacteria
CGA
Ser
>WENV170015969
AZIJ01005886
654103
Alphaproteobacteria
GAA
Phe
>WENV170016028
AZIJ01008846
659578
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK