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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016528
AZIK01011598
451922
Gammaproteobacteria
TGT
Thr
>WENV170016374
AZIK01001905
779604
Gammaproteobacteria
GCA
Cys
>WENV170016429
AZIK01004519
779604
Gammaproteobacteria
GCA
Cys
>WENV170016409
AZIK01003484
457453
Gammaproteobacteria
TTT
Lys
>WENV170016485
AZIK01009156
457453
Gammaproteobacteria
TTT
Lys
>WENV170016486
AZIK01009156
457453
Gammaproteobacteria
TTT
Lys
>WENV170016478
AZIK01008367
275465
Gammaproteobacteria
GAC
Val
>WENV170016380
AZIK01001940
271464
Gammaproteobacteria
TGG
Pro
>WENV170016382
AZIK01001940
452415
Gammaproteobacteria
GTG
His
>WENV170016446
AZIK01005764
474520
Gammaproteobacteria
CCA
Trp
>WENV170016459
AZIK01006394
653834
Gammaproteobacteria
TCC
Gly
>WENV170016359
AZIK01001103
87529
Gammaproteobacteria
GGA
Ser
>WENV170016475
AZIK01008046
451784
Gammaproteobacteria
GAA
Phe
>WENV170016351
AZIK01000769
278155
Gammaproteobacteria
TGG
Pro
>WENV170016488
AZIK01009156
278155
Gammaproteobacteria
TGG
Pro
>WENV170016433
AZIK01004807
271458
Gammaproteobacteria
GGG
Pro
>WENV170016437
AZIK01005084
452416
Gammaproteobacteria
TTT
Lys
>WENV170016438
AZIK01005084
452416
Gammaproteobacteria
TTT
Lys
>WENV170016479
AZIK01008491
279294
Gammaproteobacteria
GGG
Pro
>WENV170016376
AZIK01001907
276185
Gammaproteobacteria
TGG
Pro
>WENV170016381
AZIK01001940
275462
Gammaproteobacteria
TCT
Arg
>WENV170016428
AZIK01004519
452412
Gammaproteobacteria
GCC
Gly
>WENV170016373
AZIK01001905
452412
Gammaproteobacteria
GCC
Gly
>WENV170016364
AZIK01001216
460378
Gammaproteobacteria
TAC
Val
>WENV170016474
AZIK01008045
113284
Gammaproteobacteria
CAG
Leu
>WENV170016462
AZIK01006644
271460
Gammaproteobacteria
CGG
Pro
>WENV170016457
AZIK01006394
452404
Gammaproteobacteria
TGT
Thr
>WENV170016487
AZIK01009156
474503
Gammaproteobacteria
GTT
Asn
>WENV170016354
AZIK01000769
474503
Gammaproteobacteria
GTT
Asn
>WENV170016533
AZIK01012140
275549
Gammaproteobacteria
CAT
Met
>WENV170016421
AZIK01004246
271200
Gammaproteobacteria
CAT
Met
>WENV170016514
AZIK01011467
459752
Gammaproteobacteria
TTC
Glu
>WENV170016344
AZIK01000769
459752
Gammaproteobacteria
TTC
Glu
>WENV170016476
AZIK01008345
456709
Gammaproteobacteria
TGC
Ala
>WENV170016511
AZIK01011344
112371
Gammaproteobacteria
CAA
Leu
>WENV170016362
AZIK01001216
452410
Gammaproteobacteria
TAC
Val
>WENV170016418
AZIK01004087
457459
Gammaproteobacteria
GGC
Ala
>WENV170016536
AZIK01012381
452414
Gammaproteobacteria
TTC
Glu
>WENV170016358
AZIK01001046
452414
Gammaproteobacteria
TTC
Glu
>WENV170016408
AZIK01003478
30354
Gammaproteobacteria
TGA
Ser
>WENV170016397
AZIK01002829
657393
Gammaproteobacteria
TCC
Gly
>WENV170016348
AZIK01000769
474506
Gammaproteobacteria
GCC
Gly
>WENV170016345
AZIK01000769
474506
Gammaproteobacteria
GCC
Gly
>WENV170016458
AZIK01006394
184132
Gammaproteobacteria
GTA
Tyr
>WENV170016355
AZIK01000770
273328
Gammaproteobacteria
GAC
Val
>WENV170016480
AZIK01008533
452407
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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