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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016564
AZMM01000983
463820
Bacillota
TGG
Pro
>WENV170016630
AZMM01018825
463820
Bacillota
TGG
Pro
>WENV170016638
AZMM01018827
452445
Bacillota
TAC
Val
>WENV170016641
AZMM01018827
452445
Bacillota
TAC
Val
>WENV170016607
AZMM01012627
464159
Bacillota
GGT
Thr
>WENV170016619
AZMM01018489
451587
Bacillota
TGC
Ala
>WENV170016541
AZMM01000155
466746
Bacillota
GAA
Phe
>WENV170016588
AZMM01003512
466746
Bacillota
GAA
Phe
>WENV170016636
AZMM01018827
653855
Bacillota
GTT
Asn
>WENV170016559
AZMM01000874
452121
Bacillota
GTT
Asn
>WENV170016631
AZMM01018825
271031
Bacillota
CAT
Met
>WENV170016568
AZMM01001084
660225
Bacillota
CAT
Met
>WENV170016614
AZMM01018329
653661
Bacillota
>WENV170016563
AZMM01000983
271479
Bacillota
TCT
Arg
>WENV170016583
AZMM01002521
271479
Bacillota
TCT
Arg
>WENV170016593
AZMM01005334
779608
Bacillota
TCC
Gly
>WENV170016586
AZMM01003363
779608
Bacillota
TCC
Gly
>WENV170016584
AZMM01002521
779608
Bacillota
TCC
Gly
>WENV170016571
AZMM01001696
464161
Bacillota
TAC
Val
>WENV170016643
AZMM01018827
218501
Bacillota
GTA
Tyr
>WENV170016640
AZMM01018827
218501
Bacillota
GTA
Tyr
>WENV170016637
AZMM01018827
218501
Bacillota
GTA
Tyr
>WENV170016598
AZMM01007458
277091
Bacillota
GAT
Ile
>WENV170016592
AZMM01005334
659939
Bacillota
GCC
Gly
>WENV170016585
AZMM01003363
659939
Bacillota
GCC
Gly
>WENV170016639
AZMM01018827
653845
Bacillota
TGT
Thr
>WENV170016642
AZMM01018827
653845
Bacillota
TGT
Thr
>WENV170016646
AZMM01018927
31173
Bacillota
TGA
Ser
>WENV170016587
AZMM01003512
451472
Bacillota
GTC
Asp
>WENV170016561
AZMM01000930
282519
Bacillota
TGG
Pro
>WENV170016582
AZMM01002239
464269
Bacillota
TTT
Lys
>WENV170016560
AZMM01000874
464269
Bacillota
TTT
Lys
>WENV170016635
AZMM01018826
653851
Bacillota
GTT
Asn
>WENV170016547
AZMM01000261
451862
Bacillota
TGC
Ala
>WENV170016632
AZMM01018825
451862
Bacillota
TGC
Ala
>WENV170016570
AZMM01001696
660228
Bacillota
TTC
Glu
>WENV170016633
AZMM01018825
452435
Bacillota
GAA
Phe
>WENV170016540
AZMM01000096
466751
Bacillota
TGC
Ala
>WENV170016634
AZMM01018826
72727
Bacillota
TAA
Leu
>WENV170016567
AZMM01001025
72727
Bacillota
TAA
Leu
>WENV170016609
AZMM01012872
282517
Bacillota
ACG
Arg
>WENV170016608
AZMM01012627
282408
Bacillota
CAT
Met
>WENV170016562
AZMM01000930
779402
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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