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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV083479
BAAX01027527
452350
Actinomycetota
CAC
Val
>WENV083504
BAAX01029382
451359
Actinomycetota
TTT
Lys
>WENV083203
BAAX01006259
451442
Actinomycetota
GGC
Ala
>WENV083478
BAAX01027527
451442
Actinomycetota
GGC
Ala
>WENV083489
BAAX01028257
451442
Actinomycetota
GGC
Ala
>WENV083270
BAAX01010449
270467
Actinomycetota
TGG
Pro
>WENV083217
BAAX01006592
228568
Actinomycetota
TAA
Leu
>WENV083294
BAAX01012056
273894
Actinomycetota
TAC
Val
>WENV083175
BAAX01005506
653368
Actinomycetota
CTG
Gln
>WENV083496
BAAX01028942
653368
Actinomycetota
CTG
Gln
>WENV083389
BAAX01017729
270411
Actinomycetota
ACG
Arg
>WENV083390
BAAX01017729
270411
Actinomycetota
ACG
Arg
>WENV083290
BAAX01011594
270415
Actinomycetota
TAT
Ile
>WENV083097
BAAX01002419
228578
Actinomycetota
TAA
Leu
>WENV083251
BAAX01008469
270403
Actinomycetota
TGT
Thr
>WENV083367
BAAX01016499
653353
Actinomycetota
GAC
Val
>WENV083495
BAAX01028942
451402
Actinomycetota
CTC
Glu
>WENV083176
BAAX01005506
451402
Actinomycetota
CTC
Glu
>WENV083281
BAAX01010998
466731
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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