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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV083846
BAAY01011433
451405
Actinomycetota
CTC
Glu
>WENV083897
BAAY01014273
451412
Actinomycetota
GTT
Asn
>WENV083750
BAAY01005286
451381
Actinomycetota
CGT
Thr
>WENV083682
BAAY01002815
451359
Actinomycetota
TTT
Lys
>WENV083946
BAAY01020435
451359
Actinomycetota
TTT
Lys
>WENV083639
BAAY01001313
30276
Actinomycetota
GCT
Ser
>WENV083856
BAAY01011977
30281
Actinomycetota
GAG
Leu
>WENV084042
BAAY01029634
270486
Actinomycetota
CGG
Pro
>WENV084044
BAAY01029919
451442
Actinomycetota
GGC
Ala
>WENV083958
BAAY01021493
270467
Actinomycetota
TGG
Pro
>WENV083603
BAAY01000628
86856
Actinomycetota
TGA
Ser
>WENV083891
BAAY01013826
228568
Actinomycetota
TAA
Leu
>WENV083749
BAAY01005286
217997
Actinomycetota
TAG
Leu
>WENV084029
BAAY01028897
653368
Actinomycetota
CTG
Gln
>WENV083847
BAAY01011433
653368
Actinomycetota
CTG
Gln
>WENV083840
BAAY01011216
653368
Actinomycetota
CTG
Gln
>WENV083666
BAAY01002196
270411
Actinomycetota
ACG
Arg
>WENV083667
BAAY01002196
270411
Actinomycetota
ACG
Arg
>WENV083602
BAAY01000614
451349
Actinomycetota
CCG
Arg
>WENV083905
BAAY01015769
451413
Actinomycetota
CCT
Arg
>WENV083686
BAAY01003337
270415
Actinomycetota
TAT
Ile
>WENV083730
BAAY01004428
270422
Actinomycetota
TGG
Pro
>WENV083694
BAAY01003601
270417
Actinomycetota
CAA
Leu
>WENV083746
BAAY01005156
779382
Actinomycetota
TTG
Gln
>WENV083607
BAAY01000684
270403
Actinomycetota
TGT
Thr
>WENV083885
BAAY01013394
451410
Actinomycetota
CGT
Thr
>WENV083788
BAAY01007400
653358
Actinomycetota
GTT
Asn
>WENV083787
BAAY01007400
653358
Actinomycetota
GTT
Asn
>WENV083748
BAAY01005272
45669
Actinomycetota
GAG
Leu
>WENV083859
BAAY01012137
86861
Actinomycetota
TGA
Ser
>WENV083629
BAAY01001139
72674
Actinomycetota
CGA
Ser
>WENV083715
BAAY01004282
653353
Actinomycetota
GAC
Val
>WENV083920
BAAY01017304
451418
Actinomycetota
CCT
Arg
>WENV083921
BAAY01017305
451418
Actinomycetota
CCT
Arg
>WENV083835
BAAY01010946
270451
Actinomycetota
GTC
Asp
>WENV083850
BAAY01011623
270451
Actinomycetota
GTC
Asp
>WENV083985
BAAY01025632
451432
Actinomycetota
GTT
Asn
>WENV083789
BAAY01007494
30280
Actinomycetota
GAG
Leu
>WENV083938
BAAY01019788
779392
Actinomycetota
CCC
Gly
>WENV083980
BAAY01024514
270520
Actinomycetota
CAT
Met
>WENV083706
BAAY01004146
270545
Actinomycetota
CAT
Met
>WENV084045
BAAY01029919
451443
Actinomycetota
TGC
Ala
>WENV083839
BAAY01011216
451402
Actinomycetota
CTC
Glu
>WENV083961
BAAY01021603
270468
Actinomycetota
GAT
Ile
>WENV083959
BAAY01021603
270468
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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