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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170020723
BBPE01020807
654745
Alphaproteobacteria
CAC
Val
>WENV170020068
BBPE01002756
273448
Alphaproteobacteria
CGG
Pro
>WENV170020750
BBPE01022820
273066
Alphaproteobacteria
GTC
Asp
>WENV170020603
BBPE01014001
454054
Alphaproteobacteria
TGC
Ala
>WENV170020030
BBPE01002211
272978
Alphaproteobacteria
CGG
Pro
>WENV170020550
BBPE01011459
653532
Alphaproteobacteria
GTT
Asn
>WENV170019678
BBPE01000026
455172
Alphaproteobacteria
GGC
Ala
>WENV170020220
BBPE01004338
661074
Alphaproteobacteria
GCC
Gly
>WENV170020401
BBPE01007019
661074
Alphaproteobacteria
GCC
Gly
>WENV170020524
BBPE01010430
299073
Alphaproteobacteria
GAT
Ile
>WENV170020718
BBPE01020644
273065
Alphaproteobacteria
ACG
Arg
>WENV170019837
BBPE01000920
780039
Alphaproteobacteria
GCA
Cys
>WENV170019797
BBPE01000625
464601
Alphaproteobacteria
CGT
Thr
>WENV170019699
BBPE01000091
301299
Alphaproteobacteria
CCG
Arg
>WENV170020535
BBPE01011003
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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