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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
176 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170022356
BCQK01006654
271411
Gammaproteobacteria
GGG
Pro
>WENV170022512
BCQK01017326
271411
Gammaproteobacteria
GGG
Pro
>WENV170022971
BCQK01091002
180638
Gammaproteobacteria
TAA
Leu
>WENV170023247
BCQK01178311
451622
Gammaproteobacteria
GGT
Thr
>WENV170022201
BCQK01001534
298446
Gammaproteobacteria
ACG
Arg
>WENV170022202
BCQK01001534
298446
Gammaproteobacteria
ACG
Arg
>WENV170022204
BCQK01001534
298446
Gammaproteobacteria
ACG
Arg
>WENV170022483
BCQK01014419
271453
Gammaproteobacteria
GGG
Pro
>WENV170022199
BCQK01001534
20237
Gammaproteobacteria
GCT
Ser
>WENV170022203
BCQK01001534
20237
Gammaproteobacteria
GCT
Ser
>WENV170022371
BCQK01007335
276158
Gammaproteobacteria
CCA
Trp
>WENV170022899
BCQK01074191
276158
Gammaproteobacteria
CCA
Trp
>WENV170023313
BCQK01213722
276158
Gammaproteobacteria
CCA
Trp
>WENV170023355
BCQK01238717
276158
Gammaproteobacteria
CCA
Trp
>WENV170023413
BCQK01250627
276158
Gammaproteobacteria
CCA
Trp
>WENV170023492
BCQK01263778
276158
Gammaproteobacteria
CCA
Trp
>WENV170023523
BCQK01268748
276158
Gammaproteobacteria
CCA
Trp
>WENV170023527
BCQK01268928
276158
Gammaproteobacteria
CCA
Trp
>WENV170023530
BCQK01269842
276158
Gammaproteobacteria
CCA
Trp
>WENV170022486
BCQK01015359
112422
Gammaproteobacteria
CAG
Leu
>WENV170022346
BCQK01006154
270982
Gammaproteobacteria
GAT
Ile
>WENV170022245
BCQK01002751
181632
Gammaproteobacteria
GTA
Tyr
>WENV170023088
BCQK01123779
181632
Gammaproteobacteria
GTA
Tyr
>WENV170023190
BCQK01153423
181632
Gammaproteobacteria
GTA
Tyr
>WENV170023191
BCQK01153423
181632
Gammaproteobacteria
GTA
Tyr
>WENV170023318
BCQK01218059
181632
Gammaproteobacteria
GTA
Tyr
>WENV170022185
BCQK01001360
299017
Gammaproteobacteria
TGG
Pro
>WENV170022186
BCQK01001360
299017
Gammaproteobacteria
TGG
Pro
>WENV170022270
BCQK01003451
460706
Gammaproteobacteria
TAC
Val
>WENV170022271
BCQK01003451
460706
Gammaproteobacteria
TAC
Val
>WENV170022272
BCQK01003451
460706
Gammaproteobacteria
TAC
Val
>WENV170022273
BCQK01003451
460706
Gammaproteobacteria
TAC
Val
>WENV170022274
BCQK01003451
460706
Gammaproteobacteria
TAC
Val
>WENV170022275
BCQK01003451
460706
Gammaproteobacteria
TAC
Val
>WENV170023376
BCQK01244432
157620
Gammaproteobacteria
TAA
Leu
>WENV170022829
BCQK01057432
299837
Gammaproteobacteria
CAT
Met
>WENV170022217
BCQK01002100
276162
Gammaproteobacteria
GGG
Pro
>WENV170022786
BCQK01048434
276162
Gammaproteobacteria
GGG
Pro
>WENV170023438
BCQK01255795
276162
Gammaproteobacteria
GGG
Pro
>WENV170022922
BCQK01077542
460691
Gammaproteobacteria
GTT
Asn
>WENV170022506
BCQK01017035
455855
Gammaproteobacteria
GAA
Phe
>WENV170022200
BCQK01001534
299772
Gammaproteobacteria
ACG
Arg
>WENV170022125
BCQK01000354
457438
Gammaproteobacteria
GAA
Phe
>WENV170022751
BCQK01044556
457438
Gammaproteobacteria
GAA
Phe
>WENV170023018
BCQK01102828
86880
Gammaproteobacteria
GGA
Ser
>WENV170023208
BCQK01158667
86880
Gammaproteobacteria
GGA
Ser
>WENV170023306
BCQK01210537
86880
Gammaproteobacteria
GGA
Ser
>WENV170023468
BCQK01260677
86880
Gammaproteobacteria
GGA
Ser
>WENV170022389
BCQK01008598
180135
Gammaproteobacteria
CAA
Leu
>WENV170022499
BCQK01016075
180135
Gammaproteobacteria
CAA
Leu
>WENV170022195
BCQK01001504
218157
Gammaproteobacteria
GTA
Tyr
>WENV170022234
BCQK01002501
180916
Gammaproteobacteria
TAG
Leu
>WENV170022238
BCQK01002501
180916
Gammaproteobacteria
TAG
Leu
>WENV170022990
BCQK01096519
452337
Gammaproteobacteria
GTT
Asn
>WENV170022239
BCQK01002501
671433
Gammaproteobacteria
TTG
Gln
>WENV170022230
BCQK01002368
297688
Gammaproteobacteria
TCT
Arg
>WENV170022514
BCQK01017555
86946
Gammaproteobacteria
TGA
Ser
>WENV170022927
BCQK01078419
315686
Gammaproteobacteria
ACG
Arg
>WENV170022926
BCQK01078419
315686
Gammaproteobacteria
ACG
Arg
>WENV170022215
BCQK01001784
780482
Gammaproteobacteria
GCA
Cys
>WENV170022981
BCQK01095269
780482
Gammaproteobacteria
GCA
Cys
>WENV170023375
BCQK01244432
780482
Gammaproteobacteria
GCA
Cys
>WENV170022647
BCQK01030275
274673
Gammaproteobacteria
ACG
Arg
>WENV170022648
BCQK01030275
274673
Gammaproteobacteria
ACG
Arg
>WENV170022649
BCQK01030275
274673
Gammaproteobacteria
ACG
Arg
>WENV170022336
BCQK01005951
30385
Gammaproteobacteria
GCT
Ser
>WENV170022454
BCQK01012250
180637
Gammaproteobacteria
TAG
Leu
>WENV170022246
BCQK01002751
787596
Gammaproteobacteria
TCC
Gly
>WENV170022183
BCQK01001360
301331
Gammaproteobacteria
CCG
Arg
>WENV170022584
BCQK01022818
658266
Gammaproteobacteria
CTT
Lys
>WENV170023128
BCQK01131842
781138
Gammaproteobacteria
CCC
Gly
>WENV170022821
BCQK01054993
455170
Gammaproteobacteria
TCC
Gly
>WENV170022441
BCQK01011226
180134
Gammaproteobacteria
TAG
Leu
>WENV170022482
BCQK01013964
46161
Gammaproteobacteria
CGA
Ser
>WENV170022090
BCQK01000083
301329
Gammaproteobacteria
TGG
Pro
>WENV170022654
BCQK01030956
46137
Gammaproteobacteria
GGA
Ser
>WENV170022667
BCQK01032874
46137
Gammaproteobacteria
GGA
Ser
>WENV170022542
BCQK01019037
179999
Gammaproteobacteria
CAA
Leu
>WENV170023021
BCQK01105046
157621
Gammaproteobacteria
TAA
Leu
>WENV170023104
BCQK01127119
157621
Gammaproteobacteria
TAA
Leu
>WENV170023308
BCQK01212623
157621
Gammaproteobacteria
TAA
Leu
>WENV170023316
BCQK01216663
157621
Gammaproteobacteria
TAA
Leu
>WENV170023514
BCQK01267107
157621
Gammaproteobacteria
TAA
Leu
>WENV170023518
BCQK01267535
457435
Gammaproteobacteria
GCC
Gly
>WENV170023491
BCQK01263761
457435
Gammaproteobacteria
GCC
Gly
>WENV170022214
BCQK01001784
457435
Gammaproteobacteria
GCC
Gly
>WENV170022980
BCQK01095269
457435
Gammaproteobacteria
GCC
Gly
>WENV170023378
BCQK01244793
457435
Gammaproteobacteria
GCC
Gly
>WENV170023389
BCQK01247046
457435
Gammaproteobacteria
GCC
Gly
>WENV170023410
BCQK01250305
457435
Gammaproteobacteria
GCC
Gly
>WENV170023414
BCQK01250725
457435
Gammaproteobacteria
GCC
Gly
>WENV170023425
BCQK01252653
457435
Gammaproteobacteria
GCC
Gly
>WENV170023426
BCQK01252653
457435
Gammaproteobacteria
GCC
Gly
>WENV170023433
BCQK01254116
457435
Gammaproteobacteria
GCC
Gly
>WENV170023476
BCQK01261680
457435
Gammaproteobacteria
GCC
Gly
>WENV170023256
BCQK01182642
114351
Gammaproteobacteria
GAG
Leu
>WENV170023331
BCQK01226057
114351
Gammaproteobacteria
GAG
Leu
>WENV170022707
BCQK01038242
112421
Gammaproteobacteria
TAA
Leu
>WENV170022453
BCQK01012250
481327
Gammaproteobacteria
GTG
His
>WENV170022822
BCQK01054993
655983
Gammaproteobacteria
GGT
Thr
>WENV170023562
BCQK01274430
482554
Gammaproteobacteria
TTC
Glu
>WENV170023559
BCQK01274130
482554
Gammaproteobacteria
TTC
Glu
>WENV170023550
BCQK01272847
482554
Gammaproteobacteria
TTC
Glu
>WENV170023534
BCQK01270213
482554
Gammaproteobacteria
TTC
Glu
>WENV170023520
BCQK01267592
482554
Gammaproteobacteria
TTC
Glu
>WENV170023516
BCQK01267451
482554
Gammaproteobacteria
TTC
Glu
>WENV170023500
BCQK01265096
482554
Gammaproteobacteria
TTC
Glu
>WENV170023453
BCQK01258293
482554
Gammaproteobacteria
TTC
Glu
>WENV170022830
BCQK01057474
482554
Gammaproteobacteria
TTC
Glu
>WENV170023232
BCQK01173239
482554
Gammaproteobacteria
TTC
Glu
>WENV170023253
BCQK01182071
482554
Gammaproteobacteria
TTC
Glu
>WENV170023343
BCQK01231732
482554
Gammaproteobacteria
TTC
Glu
>WENV170023397
BCQK01249181
482554
Gammaproteobacteria
TTC
Glu
>WENV170022298
BCQK01004343
481052
Gammaproteobacteria
CTT
Lys
>WENV170022709
BCQK01038698
779670
Gammaproteobacteria
CCC
Gly
>WENV170022469
BCQK01012972
779459
Gammaproteobacteria
CCA
Trp
>WENV170023240
BCQK01175077
779459
Gammaproteobacteria
CCA
Trp
>WENV170022685
BCQK01036063
452602
Gammaproteobacteria
TGC
Ala
>WENV170022231
BCQK01002462
271697
Gammaproteobacteria
GAC
Val
>WENV170022263
BCQK01003204
271697
Gammaproteobacteria
GAC
Val
>WENV170022265
BCQK01003307
271697
Gammaproteobacteria
GAC
Val
>WENV170022702
BCQK01037666
271697
Gammaproteobacteria
GAC
Val
>WENV170023440
BCQK01256108
271697
Gammaproteobacteria
GAC
Val
>WENV170023488
BCQK01263504
271697
Gammaproteobacteria
GAC
Val
>WENV170022146
BCQK01000876
457436
Gammaproteobacteria
GTG
His
>WENV170022184
BCQK01001360
457436
Gammaproteobacteria
GTG
His
>WENV170022602
BCQK01025506
113932
Gammaproteobacteria
CAA
Leu
>WENV170022631
BCQK01027934
274669
Gammaproteobacteria
CCT
Arg
>WENV170023439
BCQK01256036
279266
Gammaproteobacteria
GAC
Val
>WENV170023408
BCQK01250187
279266
Gammaproteobacteria
GAC
Val
>WENV170023407
BCQK01250187
279266
Gammaproteobacteria
GAC
Val
>WENV170023396
BCQK01249090
279266
Gammaproteobacteria
GAC
Val
>WENV170023289
BCQK01203661
279266
Gammaproteobacteria
GAC
Val
>WENV170023257
BCQK01183537
279266
Gammaproteobacteria
GAC
Val
>WENV170022385
BCQK01008389
279266
Gammaproteobacteria
GAC
Val
>WENV170022314
BCQK01004891
279266
Gammaproteobacteria
GAC
Val
>WENV170022377
BCQK01007888
501067
Gammaproteobacteria
GTT
Asn
>WENV170022378
BCQK01007888
501067
Gammaproteobacteria
GTT
Asn
>WENV170022379
BCQK01007888
501067
Gammaproteobacteria
GTT
Asn
>WENV170022380
BCQK01007888
501067
Gammaproteobacteria
GTT
Asn
>WENV170022381
BCQK01007888
501067
Gammaproteobacteria
GTT
Asn
>WENV170022144
BCQK01000876
315628
Gammaproteobacteria
TGG
Pro
>WENV170022478
BCQK01013257
87336
Gammaproteobacteria
TGA
Ser
>WENV170023110
BCQK01129449
271700
Gammaproteobacteria
CAT
Met
>WENV170023039
BCQK01109490
276152
Gammaproteobacteria
GAT
Ile
>WENV170023111
BCQK01129460
276152
Gammaproteobacteria
GAT
Ile
>WENV170023152
BCQK01138907
276152
Gammaproteobacteria
GAT
Ile
>WENV170023374
BCQK01244160
276152
Gammaproteobacteria
GAT
Ile
>WENV170023377
BCQK01244605
276152
Gammaproteobacteria
GAT
Ile
>WENV170023456
BCQK01258720
276152
Gammaproteobacteria
GAT
Ile
>WENV170023529
BCQK01269813
276152
Gammaproteobacteria
GAT
Ile
>WENV170022130
BCQK01000511
455973
Gammaproteobacteria
TTT
Lys
>WENV170022131
BCQK01000511
455973
Gammaproteobacteria
TTT
Lys
>WENV170022596
BCQK01024167
455973
Gammaproteobacteria
TTT
Lys
>WENV170022840
BCQK01059437
455973
Gammaproteobacteria
TTT
Lys
>WENV170022841
BCQK01059437
455973
Gammaproteobacteria
TTT
Lys
>WENV170022842
BCQK01059437
455973
Gammaproteobacteria
TTT
Lys
>WENV170022987
BCQK01096378
455973
Gammaproteobacteria
TTT
Lys
>WENV170022988
BCQK01096378
455973
Gammaproteobacteria
TTT
Lys
>WENV170023123
BCQK01130696
455973
Gammaproteobacteria
TTT
Lys
>WENV170023141
BCQK01134648
455973
Gammaproteobacteria
TTT
Lys
>WENV170023142
BCQK01134648
455973
Gammaproteobacteria
TTT
Lys
>WENV170023202
BCQK01156821
455973
Gammaproteobacteria
TTT
Lys
>WENV170023203
BCQK01156821
455973
Gammaproteobacteria
TTT
Lys
>WENV170023482
BCQK01262074
455973
Gammaproteobacteria
TTT
Lys
>WENV170023487
BCQK01263277
455973
Gammaproteobacteria
TTT
Lys
>WENV170023507
BCQK01266452
455973
Gammaproteobacteria
TTT
Lys
>WENV170023512
BCQK01266811
455973
Gammaproteobacteria
TTT
Lys
>WENV170023519
BCQK01267559
455973
Gammaproteobacteria
TTT
Lys
>WENV170023546
BCQK01272484
455973
Gammaproteobacteria
TTT
Lys
>WENV170023556
BCQK01273495
455973
Gammaproteobacteria
TTT
Lys
>WENV170023122
BCQK01130466
452504
Gammaproteobacteria
TGT
Thr
>WENV170022515
BCQK01017655
455864
Gammaproteobacteria
CCT
Arg
>WENV170022572
BCQK01021704
455864
Gammaproteobacteria
CCT
Arg
>WENV170023038
BCQK01109473
455864
Gammaproteobacteria
CCT
Arg
>WENV170023342
BCQK01230802
455864
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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