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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170028112
CDYE01001145
654770
Bacteroidota
GGT
Thr
>WENV170028359
CDYE01008275
653389
Bacteroidota
GGT
Thr
>WENV170028448
CDYE01010664
458644
Bacteroidota
CCC
Gly
>WENV170028075
CDYE01000218
153684
Bacteroidota
GTA
Tyr
>WENV170028117
CDYE01001245
180313
Bacteroidota
TAG
Leu
>WENV170028063
CDYE01000107
86859
Bacteroidota
TGA
Ser
>WENV170028068
CDYE01000193
86859
Bacteroidota
TGA
Ser
>WENV170028084
CDYE01000555
86859
Bacteroidota
TGA
Ser
>WENV170028329
CDYE01007619
86859
Bacteroidota
TGA
Ser
>WENV170028311
CDYE01007138
270514
Bacteroidota
GTT
Asn
>WENV170028310
CDYE01007138
270514
Bacteroidota
GTT
Asn
>WENV170028286
CDYE01006356
451389
Bacteroidota
GCC
Gly
>WENV170028163
CDYE01002488
451389
Bacteroidota
GCC
Gly
>WENV170028161
CDYE01002488
451389
Bacteroidota
GCC
Gly
>WENV170028159
CDYE01002488
451389
Bacteroidota
GCC
Gly
>WENV170028072
CDYE01000195
451389
Bacteroidota
GCC
Gly
>WENV170028070
CDYE01000195
451389
Bacteroidota
GCC
Gly
>WENV170028262
CDYE01006126
270418
Bacteroidota
GGC
Ala
>WENV170028308
CDYE01006989
277204
Bacteroidota
GTC
Asp
>WENV170028230
CDYE01004796
277204
Bacteroidota
GTC
Asp
>WENV170028307
CDYE01006988
240600
Bacteroidota
GGG
Pro
>WENV170028062
CDYE01000099
240600
Bacteroidota
GGG
Pro
>WENV170028172
CDYE01002947
779393
Bacteroidota
TTG
Gln
>WENV170028141
CDYE01002157
779393
Bacteroidota
TTG
Gln
>WENV170028421
CDYE01009795
270494
Bacteroidota
CGG
Pro
>WENV170028088
CDYE01000734
653343
Bacteroidota
CCT
Arg
>WENV170028156
CDYE01002488
30567
Bacteroidota
GGA
Ser
>WENV170028337
CDYE01007857
653774
Bacteroidota
CAT
Met
>WENV170028336
CDYE01007857
653774
Bacteroidota
CAT
Met
>WENV170028236
CDYE01005146
153692
Bacteroidota
GTA
Tyr
>WENV170028232
CDYE01004796
153692
Bacteroidota
GTA
Tyr
>WENV170028444
CDYE01010657
270851
Bacteroidota
TCT
Arg
>WENV170028099
CDYE01000798
270851
Bacteroidota
TCT
Arg
>WENV170028441
CDYE01010519
653377
Bacteroidota
CTC
Glu
>WENV170028430
CDYE01010073
653377
Bacteroidota
CTC
Glu
>WENV170028229
CDYE01004707
653377
Bacteroidota
CTC
Glu
>WENV170028149
CDYE01002427
653377
Bacteroidota
CTC
Glu
>WENV170028293
CDYE01006601
653350
Bacteroidota
GCA
Cys
>WENV170028317
CDYE01007139
653350
Bacteroidota
GCA
Cys
>WENV170028446
CDYE01010661
653350
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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