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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170028858
CDYF01020281
275710
Bacillota
CCG
Arg
>WENV170029109
CDYF01030879
275710
Bacillota
CCG
Arg
>WENV170028785
CDYF01016290
270416
Bacillota
CAC
Val
>WENV170028859
CDYF01020326
467910
Bacillota
TGC
Ala
>WENV170028524
CDYF01003104
86860
Bacillota
TGA
Ser
>WENV170028919
CDYF01023695
86860
Bacillota
TGA
Ser
>WENV170028525
CDYF01003104
8223
Bacillota
GCT
Ser
>WENV170028920
CDYF01023695
8223
Bacillota
GCT
Ser
>WENV170028949
CDYF01024500
779387
Bacillota
TTG
Gln
>WENV170029088
CDYF01030370
466790
Bacillota
CGG
Pro
>WENV170029042
CDYF01028627
466790
Bacillota
CGG
Pro
>WENV170029057
CDYF01029208
270426
Bacillota
GAT
Ile
>WENV170029054
CDYF01028950
451355
Bacillota
GAC
Val
>WENV170028493
CDYF01001974
468336
Bacillota
GCC
Gly
>WENV170028703
CDYF01012839
270438
Bacillota
TCT
Arg
>WENV170028777
CDYF01016045
451352
Bacillota
GGT
Thr
>WENV170029056
CDYF01029208
467963
Bacillota
TGC
Ala
>WENV170028691
CDYF01012002
112239
Bacillota
CAG
Leu
>WENV170029009
CDYF01027708
451398
Bacillota
TGC
Ala
>WENV170028620
CDYF01008161
466782
Bacillota
CCC
Gly
>WENV170029087
CDYF01030370
779385
Bacillota
CTG
Gln
>WENV170028834
CDYF01019160
779385
Bacillota
CTG
Gln
>WENV170029137
CDYF01032306
270546
Bacillota
CAT
Met
>WENV170028702
CDYF01012832
20504
Bacillota
GGA
Ser
>WENV170028707
CDYF01013089
451375
Bacillota
GGC
Ala
>WENV170028864
CDYF01020426
270447
Bacillota
GTT
Asn
>WENV170028863
CDYF01020426
653369
Bacillota
CTC
Glu
>WENV170028557
CDYF01004345
653369
Bacillota
CTC
Glu
>WENV170029166
CDYF01033633
653347
Bacillota
TGT
Thr
>WENV170028725
CDYF01013755
454988
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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