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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170029989
CDYH01010061
275710
Bacillota
CCG
Arg
>WENV170029893
CDYH01005603
270416
Bacillota
CAC
Val
>WENV170029997
CDYH01010896
270416
Bacillota
CAC
Val
>WENV170030000
CDYH01011209
455828
Bacillota
TAC
Val
>WENV170030112
CDYH01021810
653346
Bacillota
TTC
Glu
>WENV170029860
CDYH01003673
86860
Bacillota
TGA
Ser
>WENV170029861
CDYH01003673
8223
Bacillota
GCT
Ser
>WENV170029971
CDYH01008879
451355
Bacillota
GAC
Val
>WENV170029846
CDYH01002875
451355
Bacillota
GAC
Val
>WENV170029950
CDYH01007935
661851
Bacillota
GCA
Cys
>WENV170030036
CDYH01013426
270438
Bacillota
TCT
Arg
>WENV170030065
CDYH01016985
112239
Bacillota
CAG
Leu
>WENV170030022
CDYH01012301
153689
Bacillota
GTA
Tyr
>WENV170029994
CDYH01010598
153689
Bacillota
GTA
Tyr
>WENV170029952
CDYH01007996
284668
Bacillota
GTC
Asp
>WENV170030125
CDYH01023293
466782
Bacillota
CCC
Gly
>WENV170029812
CDYH01001320
779385
Bacillota
CTG
Gln
>WENV170029975
CDYH01009314
451414
Bacillota
TGC
Ala
>WENV170029931
CDYH01006551
451414
Bacillota
TGC
Ala
>WENV170029948
CDYH01007718
20504
Bacillota
GGA
Ser
>WENV170030068
CDYH01017712
451384
Bacillota
TGG
Pro
>WENV170029844
CDYH01002734
270447
Bacillota
GTT
Asn
>WENV170029843
CDYH01002734
653369
Bacillota
CTC
Glu
>WENV170030021
CDYH01012283
270399
Bacillota
GAT
Ile
>WENV170030071
CDYH01017732
653347
Bacillota
TGT
Thr
>WENV170029986
CDYH01009661
270405
Bacillota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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