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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170030143
CDYI01000565
451658
Actinomycetota
CCG
Arg
>WENV170031408
CDYI01053493
281831
Actinomycetota
TGG
Pro
>WENV170031495
CDYI01058499
451405
Actinomycetota
CTC
Glu
>WENV170030687
CDYI01024062
270710
Actinomycetota
CAT
Met
>WENV170031399
CDYI01052916
270486
Actinomycetota
CGG
Pro
>WENV170030919
CDYI01033166
451659
Actinomycetota
CCT
Arg
>WENV170031042
CDYI01038252
451655
Actinomycetota
CCA
Trp
>WENV170030980
CDYI01036060
451474
Actinomycetota
CAC
Val
>WENV170030910
CDYI01033007
451474
Actinomycetota
CAC
Val
>WENV170030219
CDYI01004211
779444
Actinomycetota
TTG
Gln
>WENV170030951
CDYI01034689
153702
Actinomycetota
CAG
Leu
>WENV170031229
CDYI01046439
45685
Actinomycetota
GCT
Ser
>WENV170030769
CDYI01027916
217997
Actinomycetota
TAG
Leu
>WENV170031496
CDYI01058499
653368
Actinomycetota
CTG
Gln
>WENV170030208
CDYI01003859
270704
Actinomycetota
ACG
Arg
>WENV170030207
CDYI01003859
270704
Actinomycetota
ACG
Arg
>WENV170030753
CDYI01026805
232508
Actinomycetota
TAA
Leu
>WENV170031089
CDYI01039729
270417
Actinomycetota
CAA
Leu
>WENV170030145
CDYI01000821
779446
Actinomycetota
CCC
Gly
>WENV170031407
CDYI01053478
451410
Actinomycetota
CGT
Thr
>WENV170031411
CDYI01053666
86861
Actinomycetota
TGA
Ser
>WENV170030808
CDYI01029369
270707
Actinomycetota
GAT
Ile
>WENV170031094
CDYI01040183
451469
Actinomycetota
GTG
His
>WENV170030504
CDYI01015915
86885
Actinomycetota
GGA
Ser
>WENV170030768
CDYI01027916
451455
Actinomycetota
CGT
Thr
>WENV170031054
CDYI01038332
270498
Actinomycetota
TAC
Val
>WENV170031482
CDYI01057619
30280
Actinomycetota
GAG
Leu
>WENV170030809
CDYI01029369
451443
Actinomycetota
TGC
Ala
>WENV170030761
CDYI01027354
270705
Actinomycetota
TCT
Arg
>WENV170031311
CDYI01050093
179947
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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