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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170031178
CDYI01044434
270507
Bacillota
GTC
Asp
>WENV170031316
CDYI01050380
270507
Bacillota
GTC
Asp
>WENV170030497
CDYI01015901
275613
Bacillota
GTG
His
>WENV170030612
CDYI01020917
275710
Bacillota
CCG
Arg
>WENV170031424
CDYI01054462
275710
Bacillota
CCG
Arg
>WENV170031425
CDYI01054539
270416
Bacillota
CAC
Val
>WENV170031510
CDYI01058708
270416
Bacillota
CAC
Val
>WENV170030506
CDYI01016231
653346
Bacillota
TTC
Glu
>WENV170031168
CDYI01044068
653346
Bacillota
TTC
Glu
>WENV170031520
CDYI01058965
653346
Bacillota
TTC
Glu
>WENV170030828
CDYI01029553
270436
Bacillota
GTG
His
>WENV170030190
CDYI01002895
270436
Bacillota
GTG
His
>WENV170030306
CDYI01007653
86860
Bacillota
TGA
Ser
>WENV170030307
CDYI01007653
8223
Bacillota
GCT
Ser
>WENV170030408
CDYI01012973
270488
Bacillota
GTC
Asp
>WENV170030998
CDYI01036664
270488
Bacillota
GTC
Asp
>WENV170030285
CDYI01006889
779387
Bacillota
TTG
Gln
>WENV170031249
CDYI01047227
655659
Bacillota
CTG
Gln
>WENV170031189
CDYI01044846
465106
Bacillota
TGT
Thr
>WENV170030858
CDYI01030650
465106
Bacillota
TGT
Thr
>WENV170031544
CDYI01059772
466790
Bacillota
CGG
Pro
>WENV170030414
CDYI01012973
451373
Bacillota
TTT
Lys
>WENV170030192
CDYI01002895
451373
Bacillota
TTT
Lys
>WENV170031060
CDYI01038673
270426
Bacillota
GAT
Ile
>WENV170030678
CDYI01023850
270426
Bacillota
GAT
Ile
>WENV170031162
CDYI01043877
451367
Bacillota
TAC
Val
>WENV170030860
CDYI01030761
451355
Bacillota
GAC
Val
>WENV170031231
CDYI01046693
451355
Bacillota
GAC
Val
>WENV170031176
CDYI01044383
653367
Bacillota
CTC
Glu
>WENV170030551
CDYI01018235
653367
Bacillota
CTC
Glu
>WENV170030177
CDYI01001936
653367
Bacillota
CTC
Glu
>WENV170030835
CDYI01029887
661851
Bacillota
GCA
Cys
>WENV170030404
CDYI01012937
661851
Bacillota
GCA
Cys
>WENV170031041
CDYI01037902
270438
Bacillota
TCT
Arg
>WENV170030364
CDYI01009858
270438
Bacillota
TCT
Arg
>WENV170030781
CDYI01028333
451352
Bacillota
GGT
Thr
>WENV170031386
CDYI01052820
275959
Bacillota
CAT
Met
>WENV170030467
CDYI01015248
112239
Bacillota
CAG
Leu
>WENV170030212
CDYI01004130
451398
Bacillota
TGC
Ala
>WENV170030648
CDYI01022485
86865
Bacillota
AAG
Leu
>WENV170030647
CDYI01022485
86865
Bacillota
AAG
Leu
>WENV170031356
CDYI01051432
779389
Bacillota
TCC
Gly
>WENV170031353
CDYI01051403
779389
Bacillota
TCC
Gly
>WENV170030878
CDYI01031414
779389
Bacillota
TCC
Gly
>WENV170030826
CDYI01029553
779389
Bacillota
TCC
Gly
>WENV170030762
CDYI01027371
779389
Bacillota
TCC
Gly
>WENV170030416
CDYI01012980
779389
Bacillota
TCC
Gly
>WENV170030188
CDYI01002895
779389
Bacillota
TCC
Gly
>WENV170030496
CDYI01015901
275792
Bacillota
TCT
Arg
>WENV170030335
CDYI01008990
284661
Bacillota
CAT
Met
>WENV170030833
CDYI01029887
284668
Bacillota
GTC
Asp
>WENV170031357
CDYI01051432
274799
Bacillota
TCT
Arg
>WENV170031477
CDYI01057427
466782
Bacillota
CCC
Gly
>WENV170031013
CDYI01037140
466782
Bacillota
CCC
Gly
>WENV170030756
CDYI01026910
466782
Bacillota
CCC
Gly
>WENV170030443
CDYI01013931
179909
Bacillota
GTA
Tyr
>WENV170030411
CDYI01012973
179909
Bacillota
GTA
Tyr
>WENV170031543
CDYI01059772
779385
Bacillota
CTG
Gln
>WENV170030386
CDYI01011956
779385
Bacillota
CTG
Gln
>WENV170031122
CDYI01042055
451406
Bacillota
CTT
Lys
>WENV170030221
CDYI01004327
451406
Bacillota
CTT
Lys
>WENV170031519
CDYI01058965
270546
Bacillota
CAT
Met
>WENV170031167
CDYI01044068
270546
Bacillota
CAT
Met
>WENV170030505
CDYI01016231
270546
Bacillota
CAT
Met
>WENV170031281
CDYI01048933
451384
Bacillota
TGG
Pro
>WENV170030341
CDYI01009134
451384
Bacillota
TGG
Pro
>WENV170031439
CDYI01055228
467075
Bacillota
TGC
Ala
>WENV170031470
CDYI01056633
451375
Bacillota
GGC
Ala
>WENV170030215
CDYI01004185
451375
Bacillota
GGC
Ala
>WENV170030853
CDYI01030427
270447
Bacillota
GTT
Asn
>WENV170030445
CDYI01014359
270447
Bacillota
GTT
Asn
>WENV170030834
CDYI01029887
451376
Bacillota
GCC
Gly
>WENV170030314
CDYI01008242
451376
Bacillota
GCC
Gly
>WENV170030275
CDYI01006367
653373
Bacillota
TTC
Glu
>WENV170031383
CDYI01052820
457194
Bacillota
TAC
Val
>WENV170031317
CDYI01050380
457194
Bacillota
TAC
Val
>WENV170030608
CDYI01020707
457194
Bacillota
TAC
Val
>WENV170031232
CDYI01046749
653347
Bacillota
TGT
Thr
>WENV170030303
CDYI01007577
270405
Bacillota
ACG
Arg
>WENV170030913
CDYI01033134
780500
Bacillota
CCA
Trp
>WENV170030377
CDYI01011127
780500
Bacillota
CCA
Trp
>WENV170030640
CDYI01022464
454988
Bacillota
TGC
Ala
>WENV170030415
CDYI01012980
451372
Bacillota
GAA
Phe
>WENV170030413
CDYI01012973
451372
Bacillota
GAA
Phe
>WENV170030623
CDYI01021650
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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