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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170030628
CDYI01022064
154983
Bacteroidota
GTA
Tyr
>WENV170030553
CDYI01018237
86857
Bacteroidota
TAA
Leu
>WENV170031518
CDYI01058963
281406
Bacteroidota
GGC
Ala
>WENV170031532
CDYI01059412
270542
Bacteroidota
CAT
Met
>WENV170031533
CDYI01059412
270542
Bacteroidota
CAT
Met
>WENV170030166
CDYI01001928
270412
Bacteroidota
GTT
Asn
>WENV170030167
CDYI01001928
270412
Bacteroidota
GTT
Asn
>WENV170031445
CDYI01055315
270412
Bacteroidota
GTT
Asn
>WENV170031446
CDYI01055315
270412
Bacteroidota
GTT
Asn
>WENV170031447
CDYI01055315
270412
Bacteroidota
GTT
Asn
>WENV170031451
CDYI01055468
451354
Bacteroidota
TTT
Lys
>WENV170031375
CDYI01052388
451354
Bacteroidota
TTT
Lys
>WENV170031372
CDYI01052367
451354
Bacteroidota
TTT
Lys
>WENV170030442
CDYI01013929
451354
Bacteroidota
TTT
Lys
>WENV170030347
CDYI01009214
451354
Bacteroidota
TTT
Lys
>WENV170030591
CDYI01020631
654770
Bacteroidota
GGT
Thr
>WENV170030929
CDYI01033623
113533
Bacteroidota
CAG
Leu
>WENV170030856
CDYI01030467
113533
Bacteroidota
CAG
Leu
>WENV170030694
CDYI01024376
281835
Bacteroidota
TGT
Thr
>WENV170031367
CDYI01052007
451478
Bacteroidota
TTT
Lys
>WENV170030854
CDYI01030452
284758
Bacteroidota
GAT
Ile
>WENV170031092
CDYI01040163
658239
Bacteroidota
CTC
Glu
>WENV170031404
CDYI01053319
30311
Bacteroidota
GGA
Ser
>WENV170030465
CDYI01014924
87355
Bacteroidota
TGA
Ser
>WENV170031283
CDYI01049063
30278
Bacteroidota
GGA
Ser
>WENV170031517
CDYI01058933
112241
Bacteroidota
CAA
Leu
>WENV170031158
CDYI01043461
112241
Bacteroidota
CAA
Leu
>WENV170031157
CDYI01043458
112241
Bacteroidota
CAA
Leu
>WENV170030159
CDYI01001613
218000
Bacteroidota
CAG
Leu
>WENV170031365
CDYI01051874
270492
Bacteroidota
GTG
His
>WENV170030946
CDYI01034582
270492
Bacteroidota
GTG
His
>WENV170030938
CDYI01034081
270492
Bacteroidota
GTG
His
>WENV170030874
CDYI01031329
283437
Bacteroidota
TGT
Thr
>WENV170030372
CDYI01010711
283437
Bacteroidota
TGT
Thr
>WENV170030173
CDYI01001931
283437
Bacteroidota
TGT
Thr
>WENV170030434
CDYI01013477
281318
Bacteroidota
GTT
Asn
>WENV170030435
CDYI01013477
281318
Bacteroidota
GTT
Asn
>WENV170031243
CDYI01046852
281318
Bacteroidota
GTT
Asn
>WENV170031244
CDYI01046852
281318
Bacteroidota
GTT
Asn
>WENV170031245
CDYI01046852
281318
Bacteroidota
GTT
Asn
>WENV170030433
CDYI01013455
451360
Bacteroidota
CGT
Thr
>WENV170031136
CDYI01042524
113008
Bacteroidota
GAG
Leu
>WENV170031036
CDYI01037792
458644
Bacteroidota
CCC
Gly
>WENV170030328
CDYI01008713
458644
Bacteroidota
CCC
Gly
>WENV170031455
CDYI01055736
153684
Bacteroidota
GTA
Tyr
>WENV170031282
CDYI01048938
153684
Bacteroidota
GTA
Tyr
>WENV170030424
CDYI01012995
153684
Bacteroidota
GTA
Tyr
>WENV170030169
CDYI01001928
153684
Bacteroidota
GTA
Tyr
>WENV170031348
CDYI01051387
783463
Bacteroidota
CTG
Gln
>WENV170031250
CDYI01047229
783463
Bacteroidota
CTG
Gln
>WENV170031242
CDYI01046829
783463
Bacteroidota
CTG
Gln
>WENV170031065
CDYI01038732
783463
Bacteroidota
CTG
Gln
>WENV170030991
CDYI01036421
273124
Bacteroidota
GTC
Asp
>WENV170031428
CDYI01054757
180313
Bacteroidota
TAG
Leu
>WENV170030876
CDYI01031352
180313
Bacteroidota
TAG
Leu
>WENV170031064
CDYI01038729
86859
Bacteroidota
TGA
Ser
>WENV170030593
CDYI01020692
86859
Bacteroidota
TGA
Ser
>WENV170030388
CDYI01012074
86859
Bacteroidota
TGA
Ser
>WENV170031226
CDYI01046362
270514
Bacteroidota
GTT
Asn
>WENV170030507
CDYI01016232
270514
Bacteroidota
GTT
Asn
>WENV170030482
CDYI01015398
270514
Bacteroidota
GTT
Asn
>WENV170030163
CDYI01001886
270514
Bacteroidota
GTT
Asn
>WENV170030162
CDYI01001886
270514
Bacteroidota
GTT
Asn
>WENV170030155
CDYI01001459
451389
Bacteroidota
GCC
Gly
>WENV170031175
CDYI01044378
451389
Bacteroidota
GCC
Gly
>WENV170030326
CDYI01008681
273341
Bacteroidota
TGC
Ala
>WENV170030509
CDYI01016328
273341
Bacteroidota
TGC
Ala
>WENV170031124
CDYI01042065
179905
Bacteroidota
TAG
Leu
>WENV170030726
CDYI01025536
179905
Bacteroidota
TAG
Leu
>WENV170030186
CDYI01002514
270418
Bacteroidota
GGC
Ala
>WENV170031366
CDYI01051945
451431
Bacteroidota
CCA
Trp
>WENV170031039
CDYI01037803
277204
Bacteroidota
GTC
Asp
>WENV170031038
CDYI01037803
277204
Bacteroidota
GTC
Asp
>WENV170030340
CDYI01009053
277204
Bacteroidota
GTC
Asp
>WENV170030822
CDYI01029536
240600
Bacteroidota
GGG
Pro
>WENV170030797
CDYI01029052
240600
Bacteroidota
GGG
Pro
>WENV170030796
CDYI01029051
240600
Bacteroidota
GGG
Pro
>WENV170030767
CDYI01027797
240600
Bacteroidota
GGG
Pro
>WENV170030615
CDYI01021119
240600
Bacteroidota
GGG
Pro
>WENV170031349
CDYI01051388
779393
Bacteroidota
TTG
Gln
>WENV170031278
CDYI01048480
779393
Bacteroidota
TTG
Gln
>WENV170030609
CDYI01020709
779393
Bacteroidota
TTG
Gln
>WENV170030586
CDYI01020528
270494
Bacteroidota
CGG
Pro
>WENV170030624
CDYI01021654
782347
Bacteroidota
CTG
Gln
>WENV170031171
CDYI01044306
270471
Bacteroidota
GGC
Ala
>WENV170030366
CDYI01009875
270491
Bacteroidota
GGC
Ala
>WENV170030691
CDYI01024240
241460
Bacteroidota
TAC
Val
>WENV170030690
CDYI01024240
241460
Bacteroidota
TAC
Val
>WENV170030689
CDYI01024240
241460
Bacteroidota
TAC
Val
>WENV170030383
CDYI01011624
241460
Bacteroidota
TAC
Val
>WENV170030332
CDYI01008793
241460
Bacteroidota
TAC
Val
>WENV170030291
CDYI01007056
451484
Bacteroidota
CAT
Met
>WENV170031487
CDYI01058036
451484
Bacteroidota
CAT
Met
>WENV170031478
CDYI01057477
653343
Bacteroidota
CCT
Arg
>WENV170031415
CDYI01053895
653343
Bacteroidota
CCT
Arg
>WENV170031196
CDYI01045756
653343
Bacteroidota
CCT
Arg
>WENV170031173
CDYI01044364
653343
Bacteroidota
CCT
Arg
>WENV170031448
CDYI01055368
30567
Bacteroidota
GGA
Ser
>WENV170030778
CDYI01028172
30567
Bacteroidota
GGA
Ser
>WENV170031107
CDYI01041009
653388
Bacteroidota
TTC
Glu
>WENV170031106
CDYI01041009
653388
Bacteroidota
TTC
Glu
>WENV170030943
CDYI01034324
653388
Bacteroidota
TTC
Glu
>WENV170030942
CDYI01034324
653388
Bacteroidota
TTC
Glu
>WENV170030852
CDYI01030380
653388
Bacteroidota
TTC
Glu
>WENV170030631
CDYI01022064
463028
Bacteroidota
CAT
Met
>WENV170031347
CDYI01051387
463028
Bacteroidota
CAT
Met
>WENV170031104
CDYI01040666
653774
Bacteroidota
CAT
Met
>WENV170030525
CDYI01016845
653774
Bacteroidota
CAT
Met
>WENV170030441
CDYI01013925
653774
Bacteroidota
CAT
Met
>WENV170030153
CDYI01001166
653774
Bacteroidota
CAT
Met
>WENV170030590
CDYI01020631
153692
Bacteroidota
GTA
Tyr
>WENV170030471
CDYI01015391
153692
Bacteroidota
GTA
Tyr
>WENV170030269
CDYI01006091
153692
Bacteroidota
GTA
Tyr
>WENV170030862
CDYI01030909
153692
Bacteroidota
GTA
Tyr
>WENV170030455
CDYI01014851
270851
Bacteroidota
TCT
Arg
>WENV170031285
CDYI01049082
270851
Bacteroidota
TCT
Arg
>WENV170031548
CDYI01059909
270851
Bacteroidota
TCT
Arg
>WENV170030556
CDYI01018547
30277
Bacteroidota
GGA
Ser
>WENV170031208
CDYI01045908
30277
Bacteroidota
GGA
Ser
>WENV170031117
CDYI01041826
653377
Bacteroidota
CTC
Glu
>WENV170031503
CDYI01058520
653350
Bacteroidota
GCA
Cys
>WENV170031182
CDYI01044745
653350
Bacteroidota
GCA
Cys
>WENV170031144
CDYI01042976
653350
Bacteroidota
GCA
Cys
>WENV170031040
CDYI01037820
653350
Bacteroidota
GCA
Cys
>WENV170030791
CDYI01029049
653350
Bacteroidota
GCA
Cys
>WENV170030766
CDYI01027724
653350
Bacteroidota
GCA
Cys
>WENV170031364
CDYI01051861
451452
Bacteroidota
CCA
Trp
>WENV170030960
CDYI01035024
270497
Bacteroidota
GTG
His
>WENV170030961
CDYI01035024
270497
Bacteroidota
GTG
His
>WENV170030450
CDYI01014401
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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