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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170031852
CDYJ01019646
275613
Bacillota
GTG
His
>WENV170031640
CDYJ01005831
275710
Bacillota
CCG
Arg
>WENV170032018
CDYJ01031228
270416
Bacillota
CAC
Val
>WENV170031614
CDYJ01004164
455828
Bacillota
TAC
Val
>WENV170032242
CDYJ01046559
455828
Bacillota
TAC
Val
>WENV170031895
CDYJ01022405
653346
Bacillota
TTC
Glu
>WENV170031784
CDYJ01016058
467910
Bacillota
TGC
Ala
>WENV170031870
CDYJ01020654
86860
Bacillota
TGA
Ser
>WENV170031676
CDYJ01007698
86860
Bacillota
TGA
Ser
>WENV170031957
CDYJ01026958
779387
Bacillota
TTG
Gln
>WENV170031626
CDYJ01004984
460662
Bacillota
GCC
Gly
>WENV170031993
CDYJ01029079
460662
Bacillota
GCC
Gly
>WENV170032131
CDYJ01037989
659884
Bacillota
CTG
Gln
>WENV170032135
CDYJ01039153
659884
Bacillota
CTG
Gln
>WENV170031588
CDYJ01003183
270426
Bacillota
GAT
Ile
>WENV170031584
CDYJ01002749
451355
Bacillota
GAC
Val
>WENV170032134
CDYJ01038260
273950
Bacillota
ACG
Arg
>WENV170031783
CDYJ01016058
279224
Bacillota
GAT
Ile
>WENV170031771
CDYJ01014020
661851
Bacillota
GCA
Cys
>WENV170031846
CDYJ01019422
270438
Bacillota
TCT
Arg
>WENV170031587
CDYJ01003183
467963
Bacillota
TGC
Ala
>WENV170031723
CDYJ01010752
455831
Bacillota
GTT
Asn
>WENV170032298
CDYJ01050606
112239
Bacillota
CAG
Leu
>WENV170032065
CDYJ01034334
112239
Bacillota
CAG
Leu
>WENV170031861
CDYJ01020129
112239
Bacillota
CAG
Leu
>WENV170031984
CDYJ01028425
451398
Bacillota
TGC
Ala
>WENV170031728
CDYJ01010769
653349
Bacillota
GCC
Gly
>WENV170031570
CDYJ01001591
653349
Bacillota
GCC
Gly
>WENV170031618
CDYJ01004481
779389
Bacillota
TCC
Gly
>WENV170031682
CDYJ01007910
653398
Bacillota
CTC
Glu
>WENV170032054
CDYJ01032976
779385
Bacillota
CTG
Gln
>WENV170032190
CDYJ01042606
779385
Bacillota
CTG
Gln
>WENV170031894
CDYJ01022405
270546
Bacillota
CAT
Met
>WENV170031745
CDYJ01012018
73357
Bacillota
TGA
Ser
>WENV170031885
CDYJ01022109
451384
Bacillota
TGG
Pro
>WENV170032316
CDYJ01052176
451375
Bacillota
GGC
Ala
>WENV170031778
CDYJ01015800
451375
Bacillota
GGC
Ala
>WENV170031955
CDYJ01026808
270447
Bacillota
GTT
Asn
>WENV170031987
CDYJ01028614
653369
Bacillota
CTC
Glu
>WENV170032279
CDYJ01049002
653347
Bacillota
TGT
Thr
>WENV170032274
CDYJ01048611
658259
Bacillota
CTC
Glu
>WENV170031786
CDYJ01016058
658259
Bacillota
CTC
Glu
>WENV170031648
CDYJ01006235
658259
Bacillota
CTC
Glu
>WENV170031740
CDYJ01011606
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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