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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170031711
CDYJ01009871
779477
Bacteroidota
TTG
Gln
>WENV170031874
CDYJ01021286
779477
Bacteroidota
TTG
Gln
>WENV170031601
CDYJ01003699
281406
Bacteroidota
GGC
Ala
>WENV170031621
CDYJ01004893
451354
Bacteroidota
TTT
Lys
>WENV170031561
CDYJ01000775
654770
Bacteroidota
GGT
Thr
>WENV170032177
CDYJ01041990
654770
Bacteroidota
GGT
Thr
>WENV170031849
CDYJ01019500
113533
Bacteroidota
CAG
Leu
>WENV170032090
CDYJ01035602
113533
Bacteroidota
CAG
Leu
>WENV170032262
CDYJ01047751
779388
Bacteroidota
CTG
Gln
>WENV170032261
CDYJ01047751
779388
Bacteroidota
CTG
Gln
>WENV170032260
CDYJ01047751
779388
Bacteroidota
CTG
Gln
>WENV170032259
CDYJ01047751
779388
Bacteroidota
CTG
Gln
>WENV170031707
CDYJ01009501
779388
Bacteroidota
CTG
Gln
>WENV170031706
CDYJ01009501
779388
Bacteroidota
CTG
Gln
>WENV170031705
CDYJ01009501
779388
Bacteroidota
CTG
Gln
>WENV170031704
CDYJ01009501
779388
Bacteroidota
CTG
Gln
>WENV170031779
CDYJ01015948
451478
Bacteroidota
TTT
Lys
>WENV170031697
CDYJ01008937
451478
Bacteroidota
TTT
Lys
>WENV170032013
CDYJ01030658
458130
Bacteroidota
TTT
Lys
>WENV170031899
CDYJ01022624
284758
Bacteroidota
GAT
Ile
>WENV170032174
CDYJ01041990
658239
Bacteroidota
CTC
Glu
>WENV170032141
CDYJ01039555
658239
Bacteroidota
CTC
Glu
>WENV170031558
CDYJ01000775
658239
Bacteroidota
CTC
Glu
>WENV170031763
CDYJ01013227
112241
Bacteroidota
CAA
Leu
>WENV170032287
CDYJ01049829
458644
Bacteroidota
CCC
Gly
>WENV170032231
CDYJ01045287
458644
Bacteroidota
CCC
Gly
>WENV170031948
CDYJ01026063
153684
Bacteroidota
GTA
Tyr
>WENV170031690
CDYJ01008702
783463
Bacteroidota
CTG
Gln
>WENV170031770
CDYJ01013985
273124
Bacteroidota
GTC
Asp
>WENV170031906
CDYJ01022738
180313
Bacteroidota
TAG
Leu
>WENV170031830
CDYJ01018563
180313
Bacteroidota
TAG
Leu
>WENV170031610
CDYJ01004102
180313
Bacteroidota
TAG
Leu
>WENV170032296
CDYJ01050329
86859
Bacteroidota
TGA
Ser
>WENV170032058
CDYJ01033571
86859
Bacteroidota
TGA
Ser
>WENV170032006
CDYJ01029464
86859
Bacteroidota
TGA
Ser
>WENV170031983
CDYJ01028293
86859
Bacteroidota
TGA
Ser
>WENV170031578
CDYJ01001913
86859
Bacteroidota
TGA
Ser
>WENV170032103
CDYJ01036002
270514
Bacteroidota
GTT
Asn
>WENV170032102
CDYJ01036002
270514
Bacteroidota
GTT
Asn
>WENV170032101
CDYJ01036002
270514
Bacteroidota
GTT
Asn
>WENV170032100
CDYJ01036002
270514
Bacteroidota
GTT
Asn
>WENV170032099
CDYJ01036002
270514
Bacteroidota
GTT
Asn
>WENV170032072
CDYJ01034758
270514
Bacteroidota
GTT
Asn
>WENV170031758
CDYJ01013127
270514
Bacteroidota
GTT
Asn
>WENV170031755
CDYJ01013127
270514
Bacteroidota
GTT
Asn
>WENV170031592
CDYJ01003247
451389
Bacteroidota
GCC
Gly
>WENV170031594
CDYJ01003247
451389
Bacteroidota
GCC
Gly
>WENV170031596
CDYJ01003247
451389
Bacteroidota
GCC
Gly
>WENV170031725
CDYJ01010757
451389
Bacteroidota
GCC
Gly
>WENV170031848
CDYJ01019500
451389
Bacteroidota
GCC
Gly
>WENV170031966
CDYJ01027302
451389
Bacteroidota
GCC
Gly
>WENV170031968
CDYJ01027302
451389
Bacteroidota
GCC
Gly
>WENV170031970
CDYJ01027302
451389
Bacteroidota
GCC
Gly
>WENV170031978
CDYJ01028090
660446
Bacteroidota
CCT
Arg
>WENV170032159
CDYJ01040740
277204
Bacteroidota
GTC
Asp
>WENV170032123
CDYJ01037185
277204
Bacteroidota
GTC
Asp
>WENV170031699
CDYJ01009088
240600
Bacteroidota
GGG
Pro
>WENV170032307
CDYJ01051379
779393
Bacteroidota
TTG
Gln
>WENV170032120
CDYJ01037119
779393
Bacteroidota
TTG
Gln
>WENV170031896
CDYJ01022522
270494
Bacteroidota
CGG
Pro
>WENV170031802
CDYJ01016522
270494
Bacteroidota
CGG
Pro
>WENV170031825
CDYJ01018267
241460
Bacteroidota
TAC
Val
>WENV170031824
CDYJ01018267
241460
Bacteroidota
TAC
Val
>WENV170031823
CDYJ01018267
241460
Bacteroidota
TAC
Val
>WENV170031981
CDYJ01028202
653343
Bacteroidota
CCT
Arg
>WENV170031940
CDYJ01025773
653343
Bacteroidota
CCT
Arg
>WENV170031914
CDYJ01023482
653343
Bacteroidota
CCT
Arg
>WENV170031772
CDYJ01014351
653343
Bacteroidota
CCT
Arg
>WENV170031620
CDYJ01004754
653343
Bacteroidota
CCT
Arg
>WENV170032183
CDYJ01042421
30567
Bacteroidota
GGA
Ser
>WENV170031960
CDYJ01027302
30567
Bacteroidota
GGA
Ser
>WENV170031815
CDYJ01017729
30567
Bacteroidota
GGA
Ser
>WENV170031979
CDYJ01028090
653388
Bacteroidota
TTC
Glu
>WENV170031980
CDYJ01028090
653388
Bacteroidota
TTC
Glu
>WENV170032293
CDYJ01050210
463028
Bacteroidota
CAT
Met
>WENV170031934
CDYJ01025158
653774
Bacteroidota
CAT
Met
>WENV170031892
CDYJ01022274
653774
Bacteroidota
CAT
Met
>WENV170031762
CDYJ01013191
653774
Bacteroidota
CAT
Met
>WENV170031724
CDYJ01010754
653774
Bacteroidota
CAT
Met
>WENV170032240
CDYJ01046555
153692
Bacteroidota
GTA
Tyr
>WENV170032238
CDYJ01046554
153692
Bacteroidota
GTA
Tyr
>WENV170032176
CDYJ01041990
153692
Bacteroidota
GTA
Tyr
>WENV170032122
CDYJ01037185
153692
Bacteroidota
GTA
Tyr
>WENV170031863
CDYJ01020141
153692
Bacteroidota
GTA
Tyr
>WENV170031560
CDYJ01000775
153692
Bacteroidota
GTA
Tyr
>WENV170031694
CDYJ01008713
653377
Bacteroidota
CTC
Glu
>WENV170032111
CDYJ01036350
653350
Bacteroidota
GCA
Cys
>WENV170032048
CDYJ01032548
653350
Bacteroidota
GCA
Cys
>WENV170031889
CDYJ01022246
653350
Bacteroidota
GCA
Cys
>WENV170031877
CDYJ01021345
653350
Bacteroidota
GCA
Cys
>WENV170031860
CDYJ01020071
653350
Bacteroidota
GCA
Cys
>WENV170031752
CDYJ01012785
653350
Bacteroidota
GCA
Cys
>WENV170031747
CDYJ01012394
653350
Bacteroidota
GCA
Cys
>WENV170031803
CDYJ01016522
451452
Bacteroidota
CCA
Trp
>WENV170032151
CDYJ01040414
270497
Bacteroidota
GTG
His
>WENV170032152
CDYJ01040414
270497
Bacteroidota
GTG
His
>WENV170032153
CDYJ01040414
270497
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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