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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170032589
CDYK01007173
451336
Bacillota
GAA
Phe
>WENV170033217
CDYK01021199
451336
Bacillota
GAA
Phe
>WENV170032868
CDYK01014127
275613
Bacillota
GTG
His
>WENV170032818
CDYK01012872
275710
Bacillota
CCG
Arg
>WENV170033817
CDYK01033666
275710
Bacillota
CCG
Arg
>WENV170034250
CDYK01043378
275710
Bacillota
CCG
Arg
>WENV170032607
CDYK01007881
270416
Bacillota
CAC
Val
>WENV170033486
CDYK01026303
270416
Bacillota
CAC
Val
>WENV170033835
CDYK01033984
270416
Bacillota
CAC
Val
>WENV170032916
CDYK01014653
455828
Bacillota
TAC
Val
>WENV170033841
CDYK01034159
455828
Bacillota
TAC
Val
>WENV170033487
CDYK01026334
653346
Bacillota
TTC
Glu
>WENV170032816
CDYK01012843
653346
Bacillota
TTC
Glu
>WENV170032933
CDYK01014983
270436
Bacillota
GTG
His
>WENV170033532
CDYK01027083
86860
Bacillota
TGA
Ser
>WENV170032874
CDYK01014173
86860
Bacillota
TGA
Ser
>WENV170032658
CDYK01009351
86860
Bacillota
TGA
Ser
>WENV170033533
CDYK01027083
8223
Bacillota
GCT
Ser
>WENV170032514
CDYK01005270
8223
Bacillota
GCT
Ser
>WENV170033943
CDYK01037007
779387
Bacillota
TTG
Gln
>WENV170032973
CDYK01016314
779387
Bacillota
TTG
Gln
>WENV170032439
CDYK01003021
779387
Bacillota
TTG
Gln
>WENV170032388
CDYK01001835
655659
Bacillota
CTG
Gln
>WENV170032485
CDYK01004097
465106
Bacillota
TGT
Thr
>WENV170034367
CDYK01046081
285831
Bacillota
GTC
Asp
>WENV170033612
CDYK01029312
285831
Bacillota
GTC
Asp
>WENV170033094
CDYK01018734
466790
Bacillota
CGG
Pro
>WENV170032780
CDYK01012097
466790
Bacillota
CGG
Pro
>WENV170032336
CDYK01000686
466790
Bacillota
CGG
Pro
>WENV170033909
CDYK01036224
270426
Bacillota
GAT
Ile
>WENV170033883
CDYK01035493
270426
Bacillota
GAT
Ile
>WENV170033202
CDYK01020938
451367
Bacillota
TAC
Val
>WENV170034357
CDYK01046021
451355
Bacillota
GAC
Val
>WENV170033900
CDYK01035906
451355
Bacillota
GAC
Val
>WENV170033078
CDYK01018443
451355
Bacillota
GAC
Val
>WENV170033851
CDYK01034387
451355
Bacillota
GAC
Val
>WENV170033869
CDYK01035178
451377
Bacillota
TAC
Val
>WENV170033579
CDYK01028502
451377
Bacillota
TAC
Val
>WENV170034052
CDYK01039195
653367
Bacillota
CTC
Glu
>WENV170033659
CDYK01030761
653367
Bacillota
CTC
Glu
>WENV170033294
CDYK01022294
653367
Bacillota
CTC
Glu
>WENV170032440
CDYK01003030
653367
Bacillota
CTC
Glu
>WENV170032989
CDYK01016399
468336
Bacillota
GCC
Gly
>WENV170032911
CDYK01014648
72851
Bacillota
TGA
Ser
>WENV170033707
CDYK01031614
270438
Bacillota
TCT
Arg
>WENV170032452
CDYK01003606
270438
Bacillota
TCT
Arg
>WENV170033116
CDYK01019467
451352
Bacillota
GGT
Thr
>WENV170033115
CDYK01019467
451352
Bacillota
GGT
Thr
>WENV170033829
CDYK01033747
275959
Bacillota
CAT
Met
>WENV170033634
CDYK01029994
275959
Bacillota
CAT
Met
>WENV170032464
CDYK01003633
275959
Bacillota
CAT
Met
>WENV170033470
CDYK01025982
112239
Bacillota
CAG
Leu
>WENV170032522
CDYK01005496
112239
Bacillota
CAG
Leu
>WENV170033674
CDYK01031047
88702
Bacillota
CAG
Leu
>WENV170033673
CDYK01031047
88702
Bacillota
CAG
Leu
>WENV170033672
CDYK01031047
88702
Bacillota
CAG
Leu
>WENV170033254
CDYK01021626
86865
Bacillota
AAG
Leu
>WENV170033070
CDYK01018090
779389
Bacillota
TCC
Gly
>WENV170032931
CDYK01014983
779389
Bacillota
TCC
Gly
>WENV170032867
CDYK01014127
275792
Bacillota
TCT
Arg
>WENV170033379
CDYK01024089
274593
Bacillota
GAT
Ile
>WENV170033983
CDYK01038044
270452
Bacillota
GAT
Ile
>WENV170033345
CDYK01023450
466782
Bacillota
CCC
Gly
>WENV170033058
CDYK01017728
466782
Bacillota
CCC
Gly
>WENV170032528
CDYK01005662
179909
Bacillota
GTA
Tyr
>WENV170033296
CDYK01022373
779385
Bacillota
CTG
Gln
>WENV170033093
CDYK01018734
779385
Bacillota
CTG
Gln
>WENV170033065
CDYK01018037
779385
Bacillota
CTG
Gln
>WENV170032777
CDYK01012086
779385
Bacillota
CTG
Gln
>WENV170032502
CDYK01004882
779385
Bacillota
CTG
Gln
>WENV170032335
CDYK01000686
779385
Bacillota
CTG
Gln
>WENV170033381
CDYK01024181
451357
Bacillota
CTT
Lys
>WENV170033711
CDYK01031868
451406
Bacillota
CTT
Lys
>WENV170032934
CDYK01014999
451406
Bacillota
CTT
Lys
>WENV170032837
CDYK01013169
451414
Bacillota
TGC
Ala
>WENV170032722
CDYK01011016
451414
Bacillota
TGC
Ala
>WENV170032451
CDYK01003604
451414
Bacillota
TGC
Ala
>WENV170033348
CDYK01023479
270546
Bacillota
CAT
Met
>WENV170032441
CDYK01003174
270546
Bacillota
CAT
Met
>WENV170032943
CDYK01015208
20504
Bacillota
GGA
Ser
>WENV170032542
CDYK01005980
20504
Bacillota
GGA
Ser
>WENV170032541
CDYK01005980
20504
Bacillota
GGA
Ser
>WENV170033608
CDYK01028999
451384
Bacillota
TGG
Pro
>WENV170034205
CDYK01042373
467075
Bacillota
TGC
Ala
>WENV170033899
CDYK01035903
466773
Bacillota
GGC
Ala
>WENV170032523
CDYK01005555
466773
Bacillota
GGC
Ala
>WENV170033449
CDYK01025274
451375
Bacillota
GGC
Ala
>WENV170032621
CDYK01008288
451375
Bacillota
GGC
Ala
>WENV170032578
CDYK01006847
451375
Bacillota
GGC
Ala
>WENV170034231
CDYK01042554
270447
Bacillota
GTT
Asn
>WENV170033002
CDYK01017010
270447
Bacillota
GTT
Asn
>WENV170032720
CDYK01010967
270447
Bacillota
GTT
Asn
>WENV170033001
CDYK01017010
653369
Bacillota
CTC
Glu
>WENV170033344
CDYK01023439
270399
Bacillota
GAT
Ile
>WENV170033971
CDYK01037354
451376
Bacillota
GCC
Gly
>WENV170033942
CDYK01036965
451376
Bacillota
GCC
Gly
>WENV170033868
CDYK01035178
451376
Bacillota
GCC
Gly
>WENV170033578
CDYK01028502
451376
Bacillota
GCC
Gly
>WENV170032583
CDYK01006848
457194
Bacillota
TAC
Val
>WENV170032461
CDYK01003633
457194
Bacillota
TAC
Val
>WENV170032382
CDYK01001448
451334
Bacillota
TGT
Thr
>WENV170034162
CDYK01041109
653347
Bacillota
TGT
Thr
>WENV170032538
CDYK01005973
270405
Bacillota
ACG
Arg
>WENV170033599
CDYK01028928
780500
Bacillota
CCA
Trp
>WENV170032334
CDYK01000671
454988
Bacillota
TGC
Ala
>WENV170032742
CDYK01011336
285826
Bacillota
CAT
Met
>WENV170034169
CDYK01041357
451372
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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