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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170034878
CDYL01026079
154983
Bacteroidota
GTA
Tyr
>WENV170034673
CDYL01016593
281406
Bacteroidota
GGC
Ala
>WENV170034452
CDYL01004308
654770
Bacteroidota
GGT
Thr
>WENV170034726
CDYL01019478
113008
Bacteroidota
GAG
Leu
>WENV170034714
CDYL01018692
458644
Bacteroidota
CCC
Gly
>WENV170034963
CDYL01029591
153684
Bacteroidota
GTA
Tyr
>WENV170035022
CDYL01032486
180313
Bacteroidota
TAG
Leu
>WENV170034740
CDYL01019848
86859
Bacteroidota
TGA
Ser
>WENV170034548
CDYL01009602
86859
Bacteroidota
TGA
Ser
>WENV170034377
CDYL01000955
86859
Bacteroidota
TGA
Ser
>WENV170034373
CDYL01000195
86859
Bacteroidota
TGA
Ser
>WENV170034788
CDYL01022456
270514
Bacteroidota
GTT
Asn
>WENV170034787
CDYL01022456
270514
Bacteroidota
GTT
Asn
>WENV170034867
CDYL01025543
451389
Bacteroidota
GCC
Gly
>WENV170034865
CDYL01025543
451389
Bacteroidota
GCC
Gly
>WENV170034512
CDYL01006999
451389
Bacteroidota
GCC
Gly
>WENV170034449
CDYL01004308
451389
Bacteroidota
GCC
Gly
>WENV170034447
CDYL01004308
451389
Bacteroidota
GCC
Gly
>WENV170034445
CDYL01004308
451389
Bacteroidota
GCC
Gly
>WENV170034869
CDYL01025543
451389
Bacteroidota
GCC
Gly
>WENV170034577
CDYL01010871
270418
Bacteroidota
GGC
Ala
>WENV170034860
CDYL01025543
277204
Bacteroidota
GTC
Asp
>WENV170034754
CDYL01020620
277204
Bacteroidota
GTC
Asp
>WENV170034413
CDYL01002758
277204
Bacteroidota
GTC
Asp
>WENV170034416
CDYL01003027
240600
Bacteroidota
GGG
Pro
>WENV170034690
CDYL01017239
240600
Bacteroidota
GGG
Pro
>WENV170035036
CDYL01033293
779393
Bacteroidota
TTG
Gln
>WENV170034687
CDYL01017224
779393
Bacteroidota
TTG
Gln
>WENV170034389
CDYL01001624
270494
Bacteroidota
CGG
Pro
>WENV170034745
CDYL01019859
653343
Bacteroidota
CCT
Arg
>WENV170034861
CDYL01025543
30567
Bacteroidota
GGA
Ser
>WENV170034755
CDYL01020620
30567
Bacteroidota
GGA
Ser
>WENV170034440
CDYL01004308
30567
Bacteroidota
GGA
Ser
>WENV170034543
CDYL01009081
463028
Bacteroidota
CAT
Met
>WENV170034961
CDYL01029381
653774
Bacteroidota
CAT
Met
>WENV170034960
CDYL01029381
653774
Bacteroidota
CAT
Met
>WENV170034900
CDYL01026625
153692
Bacteroidota
GTA
Tyr
>WENV170034859
CDYL01025543
153692
Bacteroidota
GTA
Tyr
>WENV170034762
CDYL01020620
153692
Bacteroidota
GTA
Tyr
>WENV170034954
CDYL01029088
270851
Bacteroidota
TCT
Arg
>WENV170034826
CDYL01024042
270851
Bacteroidota
TCT
Arg
>WENV170034953
CDYL01028860
653377
Bacteroidota
CTC
Glu
>WENV170034830
CDYL01024473
653377
Bacteroidota
CTC
Glu
>WENV170034793
CDYL01022652
653350
Bacteroidota
GCA
Cys
>WENV170034741
CDYL01019854
653350
Bacteroidota
GCA
Cys
>WENV170034677
CDYL01016907
653350
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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