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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
128 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170035527
CDYM01021407
86857
Bacteroidota
TAA
Leu
>WENV170035366
CDYM01014420
281406
Bacteroidota
GGC
Ala
>WENV170035730
CDYM01029746
281406
Bacteroidota
GGC
Ala
>WENV170035919
CDYM01039037
270542
Bacteroidota
CAT
Met
>WENV170035492
CDYM01019838
270412
Bacteroidota
GTT
Asn
>WENV170035493
CDYM01019838
270412
Bacteroidota
GTT
Asn
>WENV170035664
CDYM01026890
270412
Bacteroidota
GTT
Asn
>WENV170035665
CDYM01026890
270412
Bacteroidota
GTT
Asn
>WENV170035060
CDYM01000913
451354
Bacteroidota
TTT
Lys
>WENV170035161
CDYM01005086
451354
Bacteroidota
TTT
Lys
>WENV170035671
CDYM01026900
451354
Bacteroidota
TTT
Lys
>WENV170035895
CDYM01037842
654770
Bacteroidota
GGT
Thr
>WENV170035593
CDYM01024476
113533
Bacteroidota
CAG
Leu
>WENV170035093
CDYM01001838
113533
Bacteroidota
CAG
Leu
>WENV170035376
CDYM01014739
281835
Bacteroidota
TGT
Thr
>WENV170035775
CDYM01031699
779388
Bacteroidota
CTG
Gln
>WENV170035774
CDYM01031699
779388
Bacteroidota
CTG
Gln
>WENV170035773
CDYM01031699
779388
Bacteroidota
CTG
Gln
>WENV170035096
CDYM01001854
779388
Bacteroidota
CTG
Gln
>WENV170035095
CDYM01001854
779388
Bacteroidota
CTG
Gln
>WENV170035766
CDYM01031355
451478
Bacteroidota
TTT
Lys
>WENV170035375
CDYM01014734
451478
Bacteroidota
TTT
Lys
>WENV170035122
CDYM01003289
451478
Bacteroidota
TTT
Lys
>WENV170035462
CDYM01019196
653389
Bacteroidota
GGT
Thr
>WENV170035705
CDYM01028527
87355
Bacteroidota
TGA
Ser
>WENV170035110
CDYM01002578
87355
Bacteroidota
TGA
Ser
>WENV170035632
CDYM01025504
241523
Bacteroidota
TAC
Val
>WENV170035157
CDYM01005086
30278
Bacteroidota
GGA
Ser
>WENV170035377
CDYM01014745
112241
Bacteroidota
CAA
Leu
>WENV170035379
CDYM01015049
218000
Bacteroidota
CAG
Leu
>WENV170035301
CDYM01010704
218000
Bacteroidota
CAG
Leu
>WENV170035298
CDYM01010704
218000
Bacteroidota
CAG
Leu
>WENV170035050
CDYM01000305
270492
Bacteroidota
GTG
His
>WENV170035508
CDYM01020430
451360
Bacteroidota
CGT
Thr
>WENV170035499
CDYM01019987
113008
Bacteroidota
GAG
Leu
>WENV170035876
CDYM01036924
458644
Bacteroidota
CCC
Gly
>WENV170035821
CDYM01033737
458644
Bacteroidota
CCC
Gly
>WENV170035489
CDYM01019838
153684
Bacteroidota
GTA
Tyr
>WENV170035481
CDYM01019582
153684
Bacteroidota
GTA
Tyr
>WENV170035265
CDYM01009647
153684
Bacteroidota
GTA
Tyr
>WENV170035855
CDYM01036198
783463
Bacteroidota
CTG
Gln
>WENV170035822
CDYM01033738
783463
Bacteroidota
CTG
Gln
>WENV170035610
CDYM01024820
273124
Bacteroidota
GTC
Asp
>WENV170035857
CDYM01036516
180313
Bacteroidota
TAG
Leu
>WENV170035812
CDYM01033417
180313
Bacteroidota
TAG
Leu
>WENV170035049
CDYM01000305
86859
Bacteroidota
TGA
Ser
>WENV170035442
CDYM01017853
86859
Bacteroidota
TGA
Ser
>WENV170035686
CDYM01027519
86859
Bacteroidota
TGA
Ser
>WENV170035761
CDYM01030756
86859
Bacteroidota
TGA
Ser
>WENV170035764
CDYM01031190
86859
Bacteroidota
TGA
Ser
>WENV170035841
CDYM01034727
86859
Bacteroidota
TGA
Ser
>WENV170035688
CDYM01027520
270514
Bacteroidota
GTT
Asn
>WENV170035687
CDYM01027520
270514
Bacteroidota
GTT
Asn
>WENV170035225
CDYM01007856
270514
Bacteroidota
GTT
Asn
>WENV170035058
CDYM01000911
451389
Bacteroidota
GCC
Gly
>WENV170035088
CDYM01001838
451389
Bacteroidota
GCC
Gly
>WENV170035090
CDYM01001838
451389
Bacteroidota
GCC
Gly
>WENV170035092
CDYM01001838
451389
Bacteroidota
GCC
Gly
>WENV170035292
CDYM01010542
451389
Bacteroidota
GCC
Gly
>WENV170035294
CDYM01010542
451389
Bacteroidota
GCC
Gly
>WENV170035457
CDYM01019194
451389
Bacteroidota
GCC
Gly
>WENV170035592
CDYM01024476
451389
Bacteroidota
GCC
Gly
>WENV170035070
CDYM01001261
179905
Bacteroidota
TAG
Leu
>WENV170035427
CDYM01017270
660446
Bacteroidota
CCT
Arg
>WENV170035228
CDYM01007856
660446
Bacteroidota
CCT
Arg
>WENV170035072
CDYM01001485
270418
Bacteroidota
GGC
Ala
>WENV170035587
CDYM01024200
270418
Bacteroidota
GGC
Ala
>WENV170035532
CDYM01021443
451431
Bacteroidota
CCA
Trp
>WENV170035348
CDYM01013813
277204
Bacteroidota
GTC
Asp
>WENV170035160
CDYM01005086
240600
Bacteroidota
GGG
Pro
>WENV170035059
CDYM01000913
240600
Bacteroidota
GGG
Pro
>WENV170035836
CDYM01034372
779393
Bacteroidota
TTG
Gln
>WENV170035649
CDYM01026206
779393
Bacteroidota
TTG
Gln
>WENV170035381
CDYM01015052
779393
Bacteroidota
TTG
Gln
>WENV170035209
CDYM01007001
779393
Bacteroidota
TTG
Gln
>WENV170035280
CDYM01009960
279189
Bacteroidota
GTT
Asn
>WENV170035279
CDYM01009960
279189
Bacteroidota
GTT
Asn
>WENV170035116
CDYM01002834
279189
Bacteroidota
GTT
Asn
>WENV170035115
CDYM01002834
279189
Bacteroidota
GTT
Asn
>WENV170035926
CDYM01039328
270494
Bacteroidota
CGG
Pro
>WENV170035066
CDYM01001227
270494
Bacteroidota
CGG
Pro
>WENV170035156
CDYM01005086
782347
Bacteroidota
CTG
Gln
>WENV170035749
CDYM01030423
270471
Bacteroidota
GGC
Ala
>WENV170035303
CDYM01010829
270491
Bacteroidota
GGC
Ala
>WENV170035552
CDYM01022416
241460
Bacteroidota
TAC
Val
>WENV170035551
CDYM01022416
241460
Bacteroidota
TAC
Val
>WENV170035550
CDYM01022416
241460
Bacteroidota
TAC
Val
>WENV170035549
CDYM01022416
241460
Bacteroidota
TAC
Val
>WENV170035334
CDYM01012758
241460
Bacteroidota
TAC
Val
>WENV170035333
CDYM01012758
241460
Bacteroidota
TAC
Val
>WENV170035332
CDYM01012758
241460
Bacteroidota
TAC
Val
>WENV170035331
CDYM01012758
241460
Bacteroidota
TAC
Val
>WENV170035450
CDYM01018193
451484
Bacteroidota
CAT
Met
>WENV170035107
CDYM01002465
451484
Bacteroidota
CAT
Met
>WENV170035528
CDYM01021407
653343
Bacteroidota
CCT
Arg
>WENV170035264
CDYM01009632
653343
Bacteroidota
CCT
Arg
>WENV170035139
CDYM01004250
30567
Bacteroidota
GGA
Ser
>WENV170035132
CDYM01003887
30567
Bacteroidota
GGA
Ser
>WENV170035084
CDYM01001838
30567
Bacteroidota
GGA
Ser
>WENV170035227
CDYM01007856
653388
Bacteroidota
TTC
Glu
>WENV170035226
CDYM01007856
653388
Bacteroidota
TTC
Glu
>WENV170035247
CDYM01008982
463028
Bacteroidota
CAT
Met
>WENV170035875
CDYM01036872
653774
Bacteroidota
CAT
Met
>WENV170035740
CDYM01030077
653774
Bacteroidota
CAT
Met
>WENV170035484
CDYM01019829
653774
Bacteroidota
CAT
Met
>WENV170035112
CDYM01002796
653774
Bacteroidota
CAT
Met
>WENV170035894
CDYM01037842
153692
Bacteroidota
GTA
Tyr
>WENV170035768
CDYM01031355
153692
Bacteroidota
GTA
Tyr
>WENV170035374
CDYM01014734
153692
Bacteroidota
GTA
Tyr
>WENV170035308
CDYM01011289
153692
Bacteroidota
GTA
Tyr
>WENV170035676
CDYM01026948
270851
Bacteroidota
TCT
Arg
>WENV170035524
CDYM01021231
270851
Bacteroidota
TCT
Arg
>WENV170035336
CDYM01012827
270851
Bacteroidota
TCT
Arg
>WENV170035886
CDYM01037179
30277
Bacteroidota
GGA
Ser
>WENV170035287
CDYM01010245
30277
Bacteroidota
GGA
Ser
>WENV170035714
CDYM01028755
467914
Bacteroidota
GCC
Gly
>WENV170035809
CDYM01033373
653377
Bacteroidota
CTC
Glu
>WENV170035608
CDYM01024733
653377
Bacteroidota
CTC
Glu
>WENV170035495
CDYM01019922
653377
Bacteroidota
CTC
Glu
>WENV170035900
CDYM01038106
653350
Bacteroidota
GCA
Cys
>WENV170035469
CDYM01019516
653350
Bacteroidota
GCA
Cys
>WENV170035402
CDYM01015677
653350
Bacteroidota
GCA
Cys
>WENV170035062
CDYM01001225
653350
Bacteroidota
GCA
Cys
>WENV170035056
CDYM01000909
653350
Bacteroidota
GCA
Cys
>WENV170035041
CDYM01000002
653350
Bacteroidota
GCA
Cys
>WENV170035927
CDYM01039328
451452
Bacteroidota
CCA
Trp
>WENV170035759
CDYM01030749
270497
Bacteroidota
GTG
His
>WENV170035119
CDYM01003118
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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