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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
137 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170036129
CDYN01005508
86857
Bacteroidota
TAA
Leu
>WENV170036479
CDYN01015271
86857
Bacteroidota
TAA
Leu
>WENV170036686
CDYN01021052
86857
Bacteroidota
TAA
Leu
>WENV170036537
CDYN01017370
470605
Bacteroidota
GAA
Phe
>WENV170036619
CDYN01019330
470605
Bacteroidota
GAA
Phe
>WENV170036319
CDYN01011405
780666
Bacteroidota
CTG
Gln
>WENV170036119
CDYN01005198
779477
Bacteroidota
TTG
Gln
>WENV170036318
CDYN01011402
779477
Bacteroidota
TTG
Gln
>WENV170036396
CDYN01013664
270542
Bacteroidota
CAT
Met
>WENV170036397
CDYN01013664
270542
Bacteroidota
CAT
Met
>WENV170036414
CDYN01014079
270412
Bacteroidota
GTT
Asn
>WENV170036413
CDYN01014079
270412
Bacteroidota
GTT
Asn
>WENV170036412
CDYN01014079
270412
Bacteroidota
GTT
Asn
>WENV170036283
CDYN01010011
451354
Bacteroidota
TTT
Lys
>WENV170036045
CDYN01003044
451354
Bacteroidota
TTT
Lys
>WENV170036039
CDYN01002691
451354
Bacteroidota
TTT
Lys
>WENV170036579
CDYN01018276
113533
Bacteroidota
CAG
Leu
>WENV170036254
CDYN01009364
113533
Bacteroidota
CAG
Leu
>WENV170036341
CDYN01012040
779388
Bacteroidota
CTG
Gln
>WENV170036340
CDYN01012040
779388
Bacteroidota
CTG
Gln
>WENV170036586
CDYN01018464
451478
Bacteroidota
TTT
Lys
>WENV170036391
CDYN01013555
451478
Bacteroidota
TTT
Lys
>WENV170036252
CDYN01009003
458130
Bacteroidota
TTT
Lys
>WENV170036146
CDYN01006233
458130
Bacteroidota
TTT
Lys
>WENV170036019
CDYN01002164
458130
Bacteroidota
TTT
Lys
>WENV170036387
CDYN01013471
653389
Bacteroidota
GGT
Thr
>WENV170036116
CDYN01005184
658239
Bacteroidota
CTC
Glu
>WENV170036655
CDYN01020071
30311
Bacteroidota
GGA
Ser
>WENV170036371
CDYN01012737
87355
Bacteroidota
TGA
Ser
>WENV170036173
CDYN01007214
87355
Bacteroidota
TGA
Ser
>WENV170036364
CDYN01012556
30278
Bacteroidota
GGA
Ser
>WENV170036105
CDYN01004689
112241
Bacteroidota
CAA
Leu
>WENV170036668
CDYN01020429
218000
Bacteroidota
CAG
Leu
>WENV170036665
CDYN01020429
218000
Bacteroidota
CAG
Leu
>WENV170036219
CDYN01008345
218000
Bacteroidota
CAG
Leu
>WENV170036216
CDYN01008345
218000
Bacteroidota
CAG
Leu
>WENV170036073
CDYN01003918
218000
Bacteroidota
CAG
Leu
>WENV170035978
CDYN01001183
218000
Bacteroidota
CAG
Leu
>WENV170035975
CDYN01001183
218000
Bacteroidota
CAG
Leu
>WENV170036372
CDYN01012737
270492
Bacteroidota
GTG
His
>WENV170036662
CDYN01020425
451360
Bacteroidota
CGT
Thr
>WENV170036538
CDYN01017371
451360
Bacteroidota
CGT
Thr
>WENV170036287
CDYN01010014
113008
Bacteroidota
GAG
Leu
>WENV170035968
CDYN01000820
458644
Bacteroidota
CCC
Gly
>WENV170036582
CDYN01018285
153684
Bacteroidota
GTA
Tyr
>WENV170036499
CDYN01016204
153684
Bacteroidota
GTA
Tyr
>WENV170036292
CDYN01010208
153684
Bacteroidota
GTA
Tyr
>WENV170036054
CDYN01003315
153684
Bacteroidota
GTA
Tyr
>WENV170036638
CDYN01019920
113161
Bacteroidota
GAG
Leu
>WENV170036636
CDYN01019920
113161
Bacteroidota
GAG
Leu
>WENV170036358
CDYN01012372
113161
Bacteroidota
GAG
Leu
>WENV170036356
CDYN01012372
113161
Bacteroidota
GAG
Leu
>WENV170036623
CDYN01019507
273124
Bacteroidota
GTC
Asp
>WENV170036031
CDYN01002507
655465
Bacteroidota
TTC
Glu
>WENV170036154
CDYN01006394
180313
Bacteroidota
TAG
Leu
>WENV170036104
CDYN01004689
180313
Bacteroidota
TAG
Leu
>WENV170036234
CDYN01008669
86859
Bacteroidota
TGA
Ser
>WENV170036201
CDYN01007932
86859
Bacteroidota
TGA
Ser
>WENV170036102
CDYN01004552
86859
Bacteroidota
TGA
Ser
>WENV170036585
CDYN01018462
270514
Bacteroidota
GTT
Asn
>WENV170036560
CDYN01018100
270514
Bacteroidota
GTT
Asn
>WENV170036558
CDYN01018100
270514
Bacteroidota
GTT
Asn
>WENV170036026
CDYN01002336
270514
Bacteroidota
GTT
Asn
>WENV170036024
CDYN01002336
270514
Bacteroidota
GTT
Asn
>WENV170036468
CDYN01015056
451389
Bacteroidota
GCC
Gly
>WENV170036466
CDYN01015056
451389
Bacteroidota
GCC
Gly
>WENV170036416
CDYN01014085
451389
Bacteroidota
GCC
Gly
>WENV170036253
CDYN01009364
451389
Bacteroidota
GCC
Gly
>WENV170036126
CDYN01005368
451389
Bacteroidota
GCC
Gly
>WENV170036289
CDYN01010017
179905
Bacteroidota
TAG
Leu
>WENV170036033
CDYN01002507
660446
Bacteroidota
CCT
Arg
>WENV170036076
CDYN01003920
270418
Bacteroidota
GGC
Ala
>WENV170036096
CDYN01004492
72680
Bacteroidota
TAA
Leu
>WENV170036618
CDYN01019299
277204
Bacteroidota
GTC
Asp
>WENV170036617
CDYN01019299
277204
Bacteroidota
GTC
Asp
>WENV170036616
CDYN01019299
277204
Bacteroidota
GTC
Asp
>WENV170036339
CDYN01012040
277204
Bacteroidota
GTC
Asp
>WENV170036338
CDYN01012040
277204
Bacteroidota
GTC
Asp
>WENV170036337
CDYN01012040
277204
Bacteroidota
GTC
Asp
>WENV170036656
CDYN01020071
240600
Bacteroidota
GGG
Pro
>WENV170036607
CDYN01019036
240600
Bacteroidota
GGG
Pro
>WENV170036257
CDYN01009366
240600
Bacteroidota
GGG
Pro
>WENV170036046
CDYN01003048
240600
Bacteroidota
GGG
Pro
>WENV170036482
CDYN01015562
779393
Bacteroidota
TTG
Gln
>WENV170036230
CDYN01008536
779393
Bacteroidota
TTG
Gln
>WENV170036117
CDYN01005187
779393
Bacteroidota
TTG
Gln
>WENV170036575
CDYN01018276
270494
Bacteroidota
CGG
Pro
>WENV170036147
CDYN01006235
270494
Bacteroidota
CGG
Pro
>WENV170036608
CDYN01019036
782347
Bacteroidota
CTG
Gln
>WENV170036654
CDYN01020071
782347
Bacteroidota
CTG
Gln
>WENV170036671
CDYN01020433
270471
Bacteroidota
GGC
Ala
>WENV170036604
CDYN01019032
270491
Bacteroidota
GGC
Ala
>WENV170036523
CDYN01016962
241460
Bacteroidota
TAC
Val
>WENV170036522
CDYN01016962
241460
Bacteroidota
TAC
Val
>WENV170036244
CDYN01008848
241460
Bacteroidota
TAC
Val
>WENV170036243
CDYN01008848
241460
Bacteroidota
TAC
Val
>WENV170036242
CDYN01008848
241460
Bacteroidota
TAC
Val
>WENV170036233
CDYN01008667
451484
Bacteroidota
CAT
Met
>WENV170036674
CDYN01020730
451484
Bacteroidota
CAT
Met
>WENV170036689
CDYN01021161
451484
Bacteroidota
CAT
Met
>WENV170036483
CDYN01015571
653343
Bacteroidota
CCT
Arg
>WENV170036130
CDYN01005508
653343
Bacteroidota
CCT
Arg
>WENV170036029
CDYN01002506
653343
Bacteroidota
CCT
Arg
>WENV170036578
CDYN01018276
30567
Bacteroidota
GGA
Ser
>WENV170036325
CDYN01011526
30567
Bacteroidota
GGA
Ser
>WENV170036030
CDYN01002507
653388
Bacteroidota
TTC
Glu
>WENV170036637
CDYN01019920
180807
Bacteroidota
CAG
Leu
>WENV170036635
CDYN01019920
180807
Bacteroidota
CAG
Leu
>WENV170036357
CDYN01012372
180807
Bacteroidota
CAG
Leu
>WENV170036355
CDYN01012372
180807
Bacteroidota
CAG
Leu
>WENV170036106
CDYN01004706
653774
Bacteroidota
CAT
Met
>WENV170036462
CDYN01015046
653774
Bacteroidota
CAT
Met
>WENV170036500
CDYN01016227
653774
Bacteroidota
CAT
Met
>WENV170036503
CDYN01016253
653774
Bacteroidota
CAT
Met
>WENV170036170
CDYN01007020
153692
Bacteroidota
GTA
Tyr
>WENV170035994
CDYN01001543
153692
Bacteroidota
GTA
Tyr
>WENV170036262
CDYN01009569
153692
Bacteroidota
GTA
Tyr
>WENV170036365
CDYN01012559
153692
Bacteroidota
GTA
Tyr
>WENV170036497
CDYN01016110
153692
Bacteroidota
GTA
Tyr
>WENV170036081
CDYN01004075
270851
Bacteroidota
TCT
Arg
>WENV170036373
CDYN01012737
30277
Bacteroidota
GGA
Ser
>WENV170036606
CDYN01019035
653377
Bacteroidota
CTC
Glu
>WENV170036061
CDYN01003522
653377
Bacteroidota
CTC
Glu
>WENV170036020
CDYN01002169
653350
Bacteroidota
GCA
Cys
>WENV170036059
CDYN01003520
653350
Bacteroidota
GCA
Cys
>WENV170036231
CDYN01008538
653350
Bacteroidota
GCA
Cys
>WENV170036320
CDYN01011407
653350
Bacteroidota
GCA
Cys
>WENV170036403
CDYN01013750
653350
Bacteroidota
GCA
Cys
>WENV170036510
CDYN01016451
653350
Bacteroidota
GCA
Cys
>WENV170036568
CDYN01018271
653350
Bacteroidota
GCA
Cys
>WENV170036660
CDYN01020220
451452
Bacteroidota
CCA
Trp
>WENV170036576
CDYN01018276
451452
Bacteroidota
CCA
Trp
>WENV170036557
CDYN01018095
270497
Bacteroidota
GTG
His
>WENV170036265
CDYN01009569
270497
Bacteroidota
GTG
His
>WENV170036264
CDYN01009569
270497
Bacteroidota
GTG
His
>WENV170036399
CDYN01013664
653342
Bacteroidota
CCG
Arg
>WENV170036205
CDYN01007935
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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