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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170037128
CDYP01022107
468330
Bacillota
GTT
Asn
>WENV170036797
CDYP01005736
458652
Bacillota
GCC
Gly
>WENV170036809
CDYP01006390
458652
Bacillota
GCC
Gly
>WENV170036765
CDYP01002807
275710
Bacillota
CCG
Arg
>WENV170036976
CDYP01014632
86860
Bacillota
TGA
Ser
>WENV170037005
CDYP01016465
86860
Bacillota
TGA
Ser
>WENV170036977
CDYP01014632
8223
Bacillota
GCT
Ser
>WENV170037121
CDYP01021381
466790
Bacillota
CGG
Pro
>WENV170036993
CDYP01015505
270426
Bacillota
GAT
Ile
>WENV170036808
CDYP01006390
451367
Bacillota
TAC
Val
>WENV170036798
CDYP01005736
451367
Bacillota
TAC
Val
>WENV170037078
CDYP01019894
451355
Bacillota
GAC
Val
>WENV170036991
CDYP01015503
451355
Bacillota
GAC
Val
>WENV170036880
CDYP01009634
661851
Bacillota
GCA
Cys
>WENV170037063
CDYP01019113
270438
Bacillota
TCT
Arg
>WENV170036762
CDYP01002599
451352
Bacillota
GGT
Thr
>WENV170037044
CDYP01018535
112239
Bacillota
CAG
Leu
>WENV170036751
CDYP01002007
451398
Bacillota
TGC
Ala
>WENV170036928
CDYP01012043
653349
Bacillota
GCC
Gly
>WENV170036761
CDYP01002599
284668
Bacillota
GTC
Asp
>WENV170036878
CDYP01009634
284668
Bacillota
GTC
Asp
>WENV170036876
CDYP01009634
284668
Bacillota
GTC
Asp
>WENV170037120
CDYP01021381
779385
Bacillota
CTG
Gln
>WENV170036970
CDYP01014447
779385
Bacillota
CTG
Gln
>WENV170036942
CDYP01012513
451357
Bacillota
CTT
Lys
>WENV170036767
CDYP01002978
451357
Bacillota
CTT
Lys
>WENV170037050
CDYP01018543
20504
Bacillota
GGA
Ser
>WENV170036738
CDYP01001230
20504
Bacillota
GGA
Ser
>WENV170036794
CDYP01005336
451384
Bacillota
TGG
Pro
>WENV170037045
CDYP01018538
467075
Bacillota
TGC
Ala
>WENV170036781
CDYP01004332
270447
Bacillota
GTT
Asn
>WENV170036816
CDYP01006750
653369
Bacillota
CTC
Glu
>WENV170036941
CDYP01012513
653369
Bacillota
CTC
Glu
>WENV170036730
CDYP01000656
270399
Bacillota
GAT
Ile
>WENV170036879
CDYP01009634
451376
Bacillota
GCC
Gly
>WENV170036877
CDYP01009634
451376
Bacillota
GCC
Gly
>WENV170036729
CDYP01000656
451344
Bacillota
TGC
Ala
>WENV170037157
CDYP01023913
451334
Bacillota
TGT
Thr
>WENV170036963
CDYP01013842
653347
Bacillota
TGT
Thr
>WENV170037014
CDYP01016858
270405
Bacillota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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