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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170036828
CDYP01006965
86857
Bacteroidota
TAA
Leu
>WENV170036839
CDYP01007176
270542
Bacteroidota
CAT
Met
>WENV170037082
CDYP01020236
270412
Bacteroidota
GTT
Asn
>WENV170037083
CDYP01020236
270412
Bacteroidota
GTT
Asn
>WENV170037084
CDYP01020236
270412
Bacteroidota
GTT
Asn
>WENV170037085
CDYP01020236
270412
Bacteroidota
GTT
Asn
>WENV170037086
CDYP01020236
270412
Bacteroidota
GTT
Asn
>WENV170036739
CDYP01001239
451354
Bacteroidota
TTT
Lys
>WENV170036886
CDYP01010012
451354
Bacteroidota
TTT
Lys
>WENV170037081
CDYP01020063
654770
Bacteroidota
GGT
Thr
>WENV170037062
CDYP01018933
113533
Bacteroidota
CAG
Leu
>WENV170036904
CDYP01010808
779388
Bacteroidota
CTG
Gln
>WENV170037155
CDYP01023646
87355
Bacteroidota
TGA
Ser
>WENV170036779
CDYP01003762
30278
Bacteroidota
GGA
Ser
>WENV170036856
CDYP01008335
218000
Bacteroidota
CAG
Leu
>WENV170037156
CDYP01023646
270492
Bacteroidota
GTG
His
>WENV170037034
CDYP01017568
270492
Bacteroidota
GTG
His
>WENV170036925
CDYP01011958
270492
Bacteroidota
GTG
His
>WENV170036826
CDYP01006796
281318
Bacteroidota
GTT
Asn
>WENV170036825
CDYP01006796
281318
Bacteroidota
GTT
Asn
>WENV170036824
CDYP01006796
281318
Bacteroidota
GTT
Asn
>WENV170037013
CDYP01016844
451360
Bacteroidota
CGT
Thr
>WENV170036768
CDYP01002994
153684
Bacteroidota
GTA
Tyr
>WENV170037001
CDYP01015930
153684
Bacteroidota
GTA
Tyr
>WENV170037041
CDYP01018401
153684
Bacteroidota
GTA
Tyr
>WENV170037136
CDYP01022507
783463
Bacteroidota
CTG
Gln
>WENV170037113
CDYP01020908
273124
Bacteroidota
GTC
Asp
>WENV170037171
CDYP01024608
180313
Bacteroidota
TAG
Leu
>WENV170036785
CDYP01004386
86859
Bacteroidota
TGA
Ser
>WENV170036887
CDYP01010035
86859
Bacteroidota
TGA
Ser
>WENV170037151
CDYP01023482
86859
Bacteroidota
TGA
Ser
>WENV170037162
CDYP01024059
86859
Bacteroidota
TGA
Ser
>WENV170037038
CDYP01018140
270514
Bacteroidota
GTT
Asn
>WENV170036973
CDYP01014473
270514
Bacteroidota
GTT
Asn
>WENV170036777
CDYP01003579
270514
Bacteroidota
GTT
Asn
>WENV170036757
CDYP01002407
179905
Bacteroidota
TAG
Leu
>WENV170037053
CDYP01018888
270418
Bacteroidota
GGC
Ala
>WENV170037067
CDYP01019235
277204
Bacteroidota
GTC
Asp
>WENV170037066
CDYP01019235
277204
Bacteroidota
GTC
Asp
>WENV170037065
CDYP01019235
277204
Bacteroidota
GTC
Asp
>WENV170037068
CDYP01019235
277204
Bacteroidota
GTC
Asp
>WENV170036985
CDYP01015078
240600
Bacteroidota
GGG
Pro
>WENV170036780
CDYP01003973
240600
Bacteroidota
GGG
Pro
>WENV170036890
CDYP01010211
779393
Bacteroidota
TTG
Gln
>WENV170036740
CDYP01001446
779393
Bacteroidota
TTG
Gln
>WENV170037159
CDYP01024031
270494
Bacteroidota
CGG
Pro
>WENV170036778
CDYP01003762
782347
Bacteroidota
CTG
Gln
>WENV170036981
CDYP01014857
270491
Bacteroidota
GGC
Ala
>WENV170037016
CDYP01017031
451484
Bacteroidota
CAT
Met
>WENV170037027
CDYP01017409
653343
Bacteroidota
CCT
Arg
>WENV170037054
CDYP01018889
653343
Bacteroidota
CCT
Arg
>WENV170036793
CDYP01005195
30567
Bacteroidota
GGA
Ser
>WENV170036724
CDYP01000240
30567
Bacteroidota
GGA
Ser
>WENV170036889
CDYP01010186
653388
Bacteroidota
TTC
Glu
>WENV170037024
CDYP01017242
463028
Bacteroidota
CAT
Met
>WENV170037018
CDYP01017052
653774
Bacteroidota
CAT
Met
>WENV170037119
CDYP01021219
153692
Bacteroidota
GTA
Tyr
>WENV170037080
CDYP01020063
153692
Bacteroidota
GTA
Tyr
>WENV170036921
CDYP01011737
153692
Bacteroidota
GTA
Tyr
>WENV170036883
CDYP01010011
270851
Bacteroidota
TCT
Arg
>WENV170036987
CDYP01015084
653377
Bacteroidota
CTC
Glu
>WENV170036959
CDYP01013809
653350
Bacteroidota
GCA
Cys
>WENV170036967
CDYP01014316
653350
Bacteroidota
GCA
Cys
>WENV170036766
CDYP01002830
270497
Bacteroidota
GTG
His
>WENV170036952
CDYP01013583
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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