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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170037729
CDYQ01023928
468330
Bacillota
GTT
Asn
>WENV170037745
CDYQ01024553
451336
Bacillota
GAA
Phe
>WENV170037768
CDYQ01026131
451468
Bacillota
TAC
Val
>WENV170037548
CDYQ01016812
270416
Bacillota
CAC
Val
>WENV170038169
CDYQ01040536
183038
Bacillota
GTA
Tyr
>WENV170037301
CDYQ01006556
653346
Bacillota
TTC
Glu
>WENV170037454
CDYQ01013598
270436
Bacillota
GTG
His
>WENV170037534
CDYQ01016264
270436
Bacillota
GTG
His
>WENV170037931
CDYQ01032442
270436
Bacillota
GTG
His
>WENV170037196
CDYQ01001815
451587
Bacillota
TGC
Ala
>WENV170037974
CDYQ01033885
270488
Bacillota
GTC
Asp
>WENV170037621
CDYQ01019972
270488
Bacillota
GTC
Asp
>WENV170037626
CDYQ01020099
779387
Bacillota
TTG
Gln
>WENV170038205
CDYQ01042002
655659
Bacillota
CTG
Gln
>WENV170037515
CDYQ01015545
465106
Bacillota
TGT
Thr
>WENV170037862
CDYQ01030198
466790
Bacillota
CGG
Pro
>WENV170037980
CDYQ01033885
451373
Bacillota
TTT
Lys
>WENV170037456
CDYQ01013598
451373
Bacillota
TTT
Lys
>WENV170038068
CDYQ01037162
270426
Bacillota
GAT
Ile
>WENV170037878
CDYQ01031112
451355
Bacillota
GAC
Val
>WENV170037447
CDYQ01013473
451355
Bacillota
GAC
Val
>WENV170038180
CDYQ01040899
653367
Bacillota
CTC
Glu
>WENV170038177
CDYQ01040895
653367
Bacillota
CTC
Glu
>WENV170037925
CDYQ01032345
653367
Bacillota
CTC
Glu
>WENV170037610
CDYQ01019561
653367
Bacillota
CTC
Glu
>WENV170037275
CDYQ01005507
653367
Bacillota
CTC
Glu
>WENV170038167
CDYQ01040368
270438
Bacillota
TCT
Arg
>WENV170038081
CDYQ01037284
270438
Bacillota
TCT
Arg
>WENV170037518
CDYQ01015549
451352
Bacillota
GGT
Thr
>WENV170037334
CDYQ01008320
451352
Bacillota
GGT
Thr
>WENV170037753
CDYQ01025016
112239
Bacillota
CAG
Leu
>WENV170037922
CDYQ01032341
465093
Bacillota
GCC
Gly
>WENV170037741
CDYQ01024323
465093
Bacillota
GCC
Gly
>WENV170037374
CDYQ01009880
153689
Bacillota
GTA
Tyr
>WENV170037392
CDYQ01011062
86865
Bacillota
AAG
Leu
>WENV170037783
CDYQ01026789
86865
Bacillota
AAG
Leu
>WENV170037618
CDYQ01019959
286459
Bacillota
CAT
Met
>WENV170038090
CDYQ01037932
779389
Bacillota
TCC
Gly
>WENV170037929
CDYQ01032442
779389
Bacillota
TCC
Gly
>WENV170037601
CDYQ01019177
779389
Bacillota
TCC
Gly
>WENV170037532
CDYQ01016264
779389
Bacillota
TCC
Gly
>WENV170037452
CDYQ01013598
779389
Bacillota
TCC
Gly
>WENV170037285
CDYQ01006023
779389
Bacillota
TCC
Gly
>WENV170037533
CDYQ01016264
275792
Bacillota
TCT
Arg
>WENV170037818
CDYQ01028565
72902
Bacillota
TAA
Leu
>WENV170037333
CDYQ01008320
284668
Bacillota
GTC
Asp
>WENV170037744
CDYQ01024553
284668
Bacillota
GTC
Asp
>WENV170037933
CDYQ01032442
451387
Bacillota
TTT
Lys
>WENV170037688
CDYQ01022601
270452
Bacillota
GAT
Ile
>WENV170037758
CDYQ01025386
466782
Bacillota
CCC
Gly
>WENV170037977
CDYQ01033885
179909
Bacillota
GTA
Tyr
>WENV170038159
CDYQ01040136
179909
Bacillota
GTA
Tyr
>WENV170037861
CDYQ01030198
779385
Bacillota
CTG
Gln
>WENV170037446
CDYQ01013351
779385
Bacillota
CTG
Gln
>WENV170037344
CDYQ01008688
779385
Bacillota
CTG
Gln
>WENV170038070
CDYQ01037179
451357
Bacillota
CTT
Lys
>WENV170037550
CDYQ01016996
451357
Bacillota
CTT
Lys
>WENV170038034
CDYQ01036191
451406
Bacillota
CTT
Lys
>WENV170037759
CDYQ01025389
451406
Bacillota
CTT
Lys
>WENV170037701
CDYQ01023027
451406
Bacillota
CTT
Lys
>WENV170037671
CDYQ01022106
451414
Bacillota
TGC
Ala
>WENV170037223
CDYQ01003027
451414
Bacillota
TGC
Ala
>WENV170037429
CDYQ01012989
20504
Bacillota
GGA
Ser
>WENV170037762
CDYQ01025701
466773
Bacillota
GGC
Ala
>WENV170037245
CDYQ01003891
466773
Bacillota
GGC
Ala
>WENV170037691
CDYQ01022617
451375
Bacillota
GGC
Ala
>WENV170038041
CDYQ01036449
270447
Bacillota
GTT
Asn
>WENV170037614
CDYQ01019765
270447
Bacillota
GTT
Asn
>WENV170038069
CDYQ01037179
653369
Bacillota
CTC
Glu
>WENV170037613
CDYQ01019765
653369
Bacillota
CTC
Glu
>WENV170037746
CDYQ01024553
451376
Bacillota
GCC
Gly
>WENV170037984
CDYQ01034423
451344
Bacillota
TGC
Ala
>WENV170037680
CDYQ01022139
458649
Bacillota
GCC
Gly
>WENV170037679
CDYQ01022139
458649
Bacillota
GCC
Gly
>WENV170037298
CDYQ01006278
458649
Bacillota
GCC
Gly
>WENV170037267
CDYQ01005049
270405
Bacillota
ACG
Arg
>WENV170037822
CDYQ01028712
454988
Bacillota
TGC
Ala
>WENV170038170
CDYQ01040536
115212
Bacillota
TAA
Leu
>WENV170037979
CDYQ01033885
451372
Bacillota
GAA
Phe
>WENV170037598
CDYQ01018950
113007
Bacillota
CAG
Leu
>WENV170037393
CDYQ01011062
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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