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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040471
CDYS01032822
451336
Bacillota
GAA
Phe
>WENV170041039
CDYS01058309
451336
Bacillota
GAA
Phe
>WENV170040424
CDYS01031135
275613
Bacillota
GTG
His
>WENV170040903
CDYS01052179
275710
Bacillota
CCG
Arg
>WENV170040040
CDYS01015178
270416
Bacillota
CAC
Val
>WENV170040029
CDYS01014226
653346
Bacillota
TTC
Glu
>WENV170040401
CDYS01030638
8223
Bacillota
GCT
Ser
>WENV170041037
CDYS01058308
779387
Bacillota
TTG
Gln
>WENV170040263
CDYS01024802
465106
Bacillota
TGT
Thr
>WENV170039742
CDYS01001841
465106
Bacillota
TGT
Thr
>WENV170039988
CDYS01012822
270426
Bacillota
GAT
Ile
>WENV170039898
CDYS01008973
270426
Bacillota
GAT
Ile
>WENV170039797
CDYS01004117
270426
Bacillota
GAT
Ile
>WENV170040330
CDYS01027460
451367
Bacillota
TAC
Val
>WENV170040180
CDYS01022045
451367
Bacillota
TAC
Val
>WENV170040340
CDYS01028362
451355
Bacillota
GAC
Val
>WENV170039890
CDYS01008519
451355
Bacillota
GAC
Val
>WENV170040778
CDYS01046839
653367
Bacillota
CTC
Glu
>WENV170040039
CDYS01014976
653367
Bacillota
CTC
Glu
>WENV170040406
CDYS01030654
270438
Bacillota
TCT
Arg
>WENV170040635
CDYS01039677
451352
Bacillota
GGT
Thr
>WENV170040436
CDYS01031624
451352
Bacillota
GGT
Thr
>WENV170040147
CDYS01020327
112239
Bacillota
CAG
Leu
>WENV170040062
CDYS01016502
112239
Bacillota
CAG
Leu
>WENV170040973
CDYS01055418
153689
Bacillota
GTA
Tyr
>WENV170040195
CDYS01022524
779389
Bacillota
TCC
Gly
>WENV170040423
CDYS01031135
275792
Bacillota
TCT
Arg
>WENV170040435
CDYS01031624
284668
Bacillota
GTC
Asp
>WENV170040413
CDYS01030751
466782
Bacillota
CCC
Gly
>WENV170040374
CDYS01030056
179909
Bacillota
GTA
Tyr
>WENV170041012
CDYS01057310
779385
Bacillota
CTG
Gln
>WENV170040644
CDYS01040151
451357
Bacillota
CTT
Lys
>WENV170039908
CDYS01009448
451357
Bacillota
CTT
Lys
>WENV170039880
CDYS01008070
451406
Bacillota
CTT
Lys
>WENV170041014
CDYS01057311
451414
Bacillota
TGC
Ala
>WENV170040841
CDYS01049481
451414
Bacillota
TGC
Ala
>WENV170040032
CDYS01014649
451414
Bacillota
TGC
Ala
>WENV170040574
CDYS01037253
20504
Bacillota
GGA
Ser
>WENV170040021
CDYS01014196
451384
Bacillota
TGG
Pro
>WENV170040752
CDYS01045684
467075
Bacillota
TGC
Ala
>WENV170039973
CDYS01012458
466773
Bacillota
GGC
Ala
>WENV170039823
CDYS01005093
466773
Bacillota
GGC
Ala
>WENV170040970
CDYS01055358
451375
Bacillota
GGC
Ala
>WENV170040857
CDYS01050481
451375
Bacillota
GGC
Ala
>WENV170040716
CDYS01043666
451375
Bacillota
GGC
Ala
>WENV170039936
CDYS01010372
451375
Bacillota
GGC
Ala
>WENV170041035
CDYS01058188
270447
Bacillota
GTT
Asn
>WENV170040999
CDYS01056848
270447
Bacillota
GTT
Asn
>WENV170040998
CDYS01056848
653369
Bacillota
CTC
Glu
>WENV170040472
CDYS01032822
451376
Bacillota
GCC
Gly
>WENV170040325
CDYS01027370
457194
Bacillota
TAC
Val
>WENV170039878
CDYS01008052
270405
Bacillota
ACG
Arg
>WENV170040585
CDYS01037744
454988
Bacillota
TGC
Ala
>WENV170039970
CDYS01012260
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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