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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040219
CDYS01023464
86857
Bacteroidota
TAA
Leu
>WENV170040019
CDYS01013922
281406
Bacteroidota
GGC
Ala
>WENV170040260
CDYS01024785
281406
Bacteroidota
GGC
Ala
>WENV170040820
CDYS01048609
281406
Bacteroidota
GGC
Ala
>WENV170040172
CDYS01021590
270542
Bacteroidota
CAT
Met
>WENV170040173
CDYS01021590
270542
Bacteroidota
CAT
Met
>WENV170040268
CDYS01024812
270542
Bacteroidota
CAT
Met
>WENV170040269
CDYS01024812
270542
Bacteroidota
CAT
Met
>WENV170040812
CDYS01048217
270412
Bacteroidota
GTT
Asn
>WENV170040813
CDYS01048217
270412
Bacteroidota
GTT
Asn
>WENV170039906
CDYS01009382
451354
Bacteroidota
TTT
Lys
>WENV170039966
CDYS01011878
451354
Bacteroidota
TTT
Lys
>WENV170040825
CDYS01049073
451354
Bacteroidota
TTT
Lys
>WENV170041046
CDYS01058840
451354
Bacteroidota
TTT
Lys
>WENV170040097
CDYS01018404
113533
Bacteroidota
CAG
Leu
>WENV170040911
CDYS01052683
281835
Bacteroidota
TGT
Thr
>WENV170040500
CDYS01034190
779388
Bacteroidota
CTG
Gln
>WENV170040548
CDYS01035636
658239
Bacteroidota
CTC
Glu
>WENV170040840
CDYS01049435
87355
Bacteroidota
TGA
Ser
>WENV170040896
CDYS01051687
30278
Bacteroidota
GGA
Ser
>WENV170040273
CDYS01025203
112241
Bacteroidota
CAA
Leu
>WENV170039827
CDYS01005316
270492
Bacteroidota
GTG
His
>WENV170040198
CDYS01022541
283437
Bacteroidota
TGT
Thr
>WENV170040331
CDYS01027728
451360
Bacteroidota
CGT
Thr
>WENV170040068
CDYS01016587
458644
Bacteroidota
CCC
Gly
>WENV170040809
CDYS01048217
153684
Bacteroidota
GTA
Tyr
>WENV170040248
CDYS01024321
783463
Bacteroidota
CTG
Gln
>WENV170039810
CDYS01004589
783463
Bacteroidota
CTG
Gln
>WENV170040557
CDYS01035934
273124
Bacteroidota
GTC
Asp
>WENV170040166
CDYS01020776
273124
Bacteroidota
GTC
Asp
>WENV170040157
CDYS01020774
273124
Bacteroidota
GTC
Asp
>WENV170040550
CDYS01035638
180313
Bacteroidota
TAG
Leu
>WENV170041049
CDYS01059314
86859
Bacteroidota
TGA
Ser
>WENV170041032
CDYS01057972
86859
Bacteroidota
TGA
Ser
>WENV170041030
CDYS01057816
86859
Bacteroidota
TGA
Ser
>WENV170041024
CDYS01057345
86859
Bacteroidota
TGA
Ser
>WENV170040222
CDYS01023775
86859
Bacteroidota
TGA
Ser
>WENV170040963
CDYS01054423
451389
Bacteroidota
GCC
Gly
>WENV170039758
CDYS01002681
179905
Bacteroidota
TAG
Leu
>WENV170040593
CDYS01037811
660446
Bacteroidota
CCT
Arg
>WENV170039719
CDYS01000684
270418
Bacteroidota
GGC
Ala
>WENV170041004
CDYS01056850
451431
Bacteroidota
CCA
Trp
>WENV170040092
CDYS01017950
240600
Bacteroidota
GGG
Pro
>WENV170040063
CDYS01016503
240600
Bacteroidota
GGG
Pro
>WENV170039965
CDYS01011878
240600
Bacteroidota
GGG
Pro
>WENV170040852
CDYS01050440
779393
Bacteroidota
TTG
Gln
>WENV170040341
CDYS01028377
779393
Bacteroidota
TTG
Gln
>WENV170040270
CDYS01024838
779393
Bacteroidota
TTG
Gln
>WENV170041042
CDYS01058321
279189
Bacteroidota
GTT
Asn
>WENV170041041
CDYS01058321
279189
Bacteroidota
GTT
Asn
>WENV170041040
CDYS01058321
279189
Bacteroidota
GTT
Asn
>WENV170039846
CDYS01006135
279189
Bacteroidota
GTT
Asn
>WENV170039845
CDYS01006135
279189
Bacteroidota
GTT
Asn
>WENV170039844
CDYS01006135
279189
Bacteroidota
GTT
Asn
>WENV170040091
CDYS01017950
782347
Bacteroidota
CTG
Gln
>WENV170040647
CDYS01040551
270471
Bacteroidota
GGC
Ala
>WENV170040638
CDYS01039736
270491
Bacteroidota
GGC
Ala
>WENV170040171
CDYS01021114
270491
Bacteroidota
GGC
Ala
>WENV170040123
CDYS01019247
241460
Bacteroidota
TAC
Val
>WENV170040122
CDYS01019247
241460
Bacteroidota
TAC
Val
>WENV170040121
CDYS01019247
241460
Bacteroidota
TAC
Val
>WENV170039889
CDYS01008517
451484
Bacteroidota
CAT
Met
>WENV170040493
CDYS01033843
451484
Bacteroidota
CAT
Met
>WENV170039838
CDYS01006100
653343
Bacteroidota
CCT
Arg
>WENV170039716
CDYS01000489
30567
Bacteroidota
GGA
Ser
>WENV170040685
CDYS01042089
653388
Bacteroidota
TTC
Glu
>WENV170040684
CDYS01042089
653388
Bacteroidota
TTC
Glu
>WENV170040511
CDYS01034675
463028
Bacteroidota
CAT
Met
>WENV170039956
CDYS01011384
653774
Bacteroidota
CAT
Met
>WENV170040736
CDYS01044434
653774
Bacteroidota
CAT
Met
>WENV170039899
CDYS01009020
30277
Bacteroidota
GGA
Ser
>WENV170040961
CDYS01054407
30277
Bacteroidota
GGA
Ser
>WENV170041000
CDYS01056850
467914
Bacteroidota
GCC
Gly
>WENV170040215
CDYS01023370
467914
Bacteroidota
GCC
Gly
>WENV170039767
CDYS01003204
653350
Bacteroidota
GCA
Cys
>WENV170040042
CDYS01015190
653350
Bacteroidota
GCA
Cys
>WENV170040160
CDYS01020775
653350
Bacteroidota
GCA
Cys
>WENV170040440
CDYS01032114
653350
Bacteroidota
GCA
Cys
>WENV170040754
CDYS01045696
653350
Bacteroidota
GCA
Cys
>WENV170040918
CDYS01053011
653350
Bacteroidota
GCA
Cys
>WENV170039832
CDYS01005933
451452
Bacteroidota
CCA
Trp
>WENV170040301
CDYS01026196
270497
Bacteroidota
GTG
His
>WENV170040922
CDYS01053127
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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