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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040303
CDYS01026228
469002
Verrucomicrobiota
CGC
Ala
>WENV170040355
CDYS01029186
662558
Verrucomicrobiota
GCC
Gly
>WENV170040607
CDYS01038709
662558
Verrucomicrobiota
GCC
Gly
>WENV170040048
CDYS01015626
663191
Verrucomicrobiota
TTG
Gln
>WENV170040599
CDYS01038250
662766
Verrucomicrobiota
CTG
Gln
>WENV170039866
CDYS01007528
662760
Verrucomicrobiota
CAC
Val
>WENV170040089
CDYS01017916
469040
Verrucomicrobiota
CAT
Met
>WENV170040544
CDYS01035604
12844
Verrucomicrobiota
GCT
Ser
>WENV170040657
CDYS01041543
286765
Verrucomicrobiota
GGG
Pro
>WENV170040047
CDYS01015626
470563
Verrucomicrobiota
GGC
Ala
>WENV170039803
CDYS01004149
468989
Verrucomicrobiota
CTT
Lys
>WENV170039802
CDYS01004149
468989
Verrucomicrobiota
CTT
Lys
>WENV170039799
CDYS01004136
242669
Verrucomicrobiota
GTC
Asp
>WENV170040940
CDYS01053531
242669
Verrucomicrobiota
GTC
Asp
>WENV170040014
CDYS01013734
663168
Verrucomicrobiota
GTT
Asn
>WENV170039801
CDYS01004149
662761
Verrucomicrobiota
CGT
Thr
>WENV170040088
CDYS01017916
662758
Verrucomicrobiota
GTG
His
>WENV170040543
CDYS01035604
286784
Verrucomicrobiota
ACG
Arg
>WENV170040771
CDYS01046718
663178
Verrucomicrobiota
GAC
Val
>WENV170040747
CDYS01045343
469030
Verrucomicrobiota
TTT
Lys
>WENV170040783
CDYS01047208
286752
Verrucomicrobiota
TCT
Arg
>WENV170040661
CDYS01041543
285841
Verrucomicrobiota
TGG
Pro
>WENV170040660
CDYS01041543
469466
Verrucomicrobiota
GAA
Phe
>WENV170039800
CDYS01004149
286773
Verrucomicrobiota
CGG
Pro
>WENV170040767
CDYS01046326
286760
Verrucomicrobiota
CAT
Met
>WENV170040769
CDYS01046717
662614
Verrucomicrobiota
GGT
Thr
>WENV170040354
CDYS01029186
663157
Verrucomicrobiota
CAT
Met
>WENV170040658
CDYS01041543
783783
Verrucomicrobiota
CCC
Gly
>WENV170040960
CDYS01054406
663193
Verrucomicrobiota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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