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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170043290
CDYU01034239
180100
Actinomycetota
GTA
Tyr
>WENV170042643
CDYU01013839
451412
Actinomycetota
GTT
Asn
>WENV170042649
CDYU01013839
451412
Actinomycetota
GTT
Asn
>WENV170042648
CDYU01013839
271422
Actinomycetota
GGG
Pro
>WENV170043808
CDYU01049611
274917
Actinomycetota
TAC
Val
>WENV170042422
CDYU01007079
451381
Actinomycetota
CGT
Thr
>WENV170043774
CDYU01048208
451359
Actinomycetota
TTT
Lys
>WENV170043288
CDYU01034239
30276
Actinomycetota
GCT
Ser
>WENV170044018
CDYU01055558
30281
Actinomycetota
GAG
Leu
>WENV170043922
CDYU01052813
270486
Actinomycetota
CGG
Pro
>WENV170043135
CDYU01029033
451442
Actinomycetota
GGC
Ala
>WENV170043855
CDYU01051160
451442
Actinomycetota
GGC
Ala
>WENV170042762
CDYU01016671
270467
Actinomycetota
TGG
Pro
>WENV170043923
CDYU01052813
86856
Actinomycetota
TGA
Ser
>WENV170043292
CDYU01034239
86856
Actinomycetota
TGA
Ser
>WENV170042760
CDYU01016671
228568
Actinomycetota
TAA
Leu
>WENV170042424
CDYU01007079
451655
Actinomycetota
CCA
Trp
>WENV170043291
CDYU01034239
271229
Actinomycetota
CAT
Met
>WENV170043123
CDYU01028446
451474
Actinomycetota
CAC
Val
>WENV170042432
CDYU01007536
284684
Actinomycetota
TCT
Arg
>WENV170042562
CDYU01011489
779444
Actinomycetota
TTG
Gln
>WENV170042423
CDYU01007079
217997
Actinomycetota
TAG
Leu
>WENV170042252
CDYU01003030
653368
Actinomycetota
CTG
Gln
>WENV170043237
CDYU01032469
653368
Actinomycetota
CTG
Gln
>WENV170043537
CDYU01040687
270411
Actinomycetota
ACG
Arg
>WENV170043536
CDYU01040687
270411
Actinomycetota
ACG
Arg
>WENV170042964
CDYU01022834
270411
Actinomycetota
ACG
Arg
>WENV170042963
CDYU01022834
270411
Actinomycetota
ACG
Arg
>WENV170043867
CDYU01051557
451349
Actinomycetota
CCG
Arg
>WENV170043868
CDYU01051731
451413
Actinomycetota
CCT
Arg
>WENV170042645
CDYU01013839
779447
Actinomycetota
GCA
Cys
>WENV170042431
CDYU01007536
270415
Actinomycetota
TAT
Ile
>WENV170042392
CDYU01006623
270415
Actinomycetota
TAT
Ile
>WENV170042761
CDYU01016671
270417
Actinomycetota
CAA
Leu
>WENV170043134
CDYU01029033
779382
Actinomycetota
TTG
Gln
>WENV170044064
CDYU01057012
270403
Actinomycetota
TGT
Thr
>WENV170043944
CDYU01053175
451410
Actinomycetota
CGT
Thr
>WENV170043287
CDYU01034239
72674
Actinomycetota
CGA
Ser
>WENV170042390
CDYU01006623
653819
Actinomycetota
TTC
Glu
>WENV170042646
CDYU01013839
653353
Actinomycetota
GAC
Val
>WENV170043117
CDYU01028115
653353
Actinomycetota
GAC
Val
>WENV170042393
CDYU01006623
270451
Actinomycetota
GTC
Asp
>WENV170042391
CDYU01006623
270451
Actinomycetota
GTC
Asp
>WENV170043872
CDYU01051831
153767
Actinomycetota
CAG
Leu
>WENV170042650
CDYU01013839
451432
Actinomycetota
GTT
Asn
>WENV170043116
CDYU01028115
452352
Actinomycetota
GTG
His
>WENV170042196
CDYU01000603
452352
Actinomycetota
GTG
His
>WENV170043873
CDYU01051831
779392
Actinomycetota
CCC
Gly
>WENV170043167
CDYU01029962
779392
Actinomycetota
CCC
Gly
>WENV170043854
CDYU01051160
451443
Actinomycetota
TGC
Ala
>WENV170043236
CDYU01032469
451402
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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