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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170045100
CDYX01029089
457039
Bacillota
GAA
Phe
>WENV170045150
CDYX01030480
457039
Bacillota
GAA
Phe
>WENV170044424
CDYX01007692
451336
Bacillota
GAA
Phe
>WENV170045085
CDYX01028716
451336
Bacillota
GAA
Phe
>WENV170045553
CDYX01041549
451336
Bacillota
GAA
Phe
>WENV170044205
CDYX01002435
458652
Bacillota
GCC
Gly
>WENV170044725
CDYX01017264
458652
Bacillota
GCC
Gly
>WENV170044158
CDYX01001345
275710
Bacillota
CCG
Arg
>WENV170044523
CDYX01009871
275710
Bacillota
CCG
Arg
>WENV170044961
CDYX01025885
270416
Bacillota
CAC
Val
>WENV170044893
CDYX01023084
653346
Bacillota
TTC
Glu
>WENV170044532
CDYX01010125
653346
Bacillota
TTC
Glu
>WENV170045263
CDYX01033668
270436
Bacillota
GTG
His
>WENV170044435
CDYX01007762
270436
Bacillota
GTG
His
>WENV170045292
CDYX01034432
86860
Bacillota
TGA
Ser
>WENV170045293
CDYX01034432
8223
Bacillota
GCT
Ser
>WENV170045525
CDYX01040657
270488
Bacillota
GTC
Asp
>WENV170045101
CDYX01029092
655659
Bacillota
CTG
Gln
>WENV170045087
CDYX01028717
655659
Bacillota
CTG
Gln
>WENV170044664
CDYX01014632
465106
Bacillota
TGT
Thr
>WENV170044417
CDYX01007439
465106
Bacillota
TGT
Thr
>WENV170045271
CDYX01033791
285831
Bacillota
GTC
Asp
>WENV170044169
CDYX01001377
285831
Bacillota
GTC
Asp
>WENV170045265
CDYX01033668
451373
Bacillota
TTT
Lys
>WENV170044593
CDYX01012723
270426
Bacillota
GAT
Ile
>WENV170044163
CDYX01001377
270426
Bacillota
GAT
Ile
>WENV170045556
CDYX01041606
451367
Bacillota
TAC
Val
>WENV170044722
CDYX01017264
451367
Bacillota
TAC
Val
>WENV170044285
CDYX01004739
451367
Bacillota
TAC
Val
>WENV170044204
CDYX01002435
451367
Bacillota
TAC
Val
>WENV170044394
CDYX01006822
451355
Bacillota
GAC
Val
>WENV170044527
CDYX01010049
451377
Bacillota
TAC
Val
>WENV170045498
CDYX01040304
653367
Bacillota
CTC
Glu
>WENV170044983
CDYX01026308
653367
Bacillota
CTC
Glu
>WENV170044887
CDYX01023056
653367
Bacillota
CTC
Glu
>WENV170044835
CDYX01020609
653367
Bacillota
CTC
Glu
>WENV170044821
CDYX01019793
653367
Bacillota
CTC
Glu
>WENV170044739
CDYX01017853
653367
Bacillota
CTC
Glu
>WENV170044362
CDYX01005833
653367
Bacillota
CTC
Glu
>WENV170045273
CDYX01033791
468336
Bacillota
GCC
Gly
>WENV170044663
CDYX01014632
468336
Bacillota
GCC
Gly
>WENV170044685
CDYX01015338
270438
Bacillota
TCT
Arg
>WENV170045305
CDYX01034791
451352
Bacillota
GGT
Thr
>WENV170044162
CDYX01001377
467963
Bacillota
TGC
Ala
>WENV170045564
CDYX01041610
88702
Bacillota
CAG
Leu
>WENV170045563
CDYX01041610
88702
Bacillota
CAG
Leu
>WENV170045240
CDYX01032856
88702
Bacillota
CAG
Leu
>WENV170045239
CDYX01032856
88702
Bacillota
CAG
Leu
>WENV170044141
CDYX01000602
465093
Bacillota
GCC
Gly
>WENV170044186
CDYX01002021
153689
Bacillota
GTA
Tyr
>WENV170045423
CDYX01038126
86865
Bacillota
AAG
Leu
>WENV170045422
CDYX01038126
86865
Bacillota
AAG
Leu
>WENV170045261
CDYX01033668
779389
Bacillota
TCC
Gly
>WENV170045160
CDYX01030615
779389
Bacillota
TCC
Gly
>WENV170044514
CDYX01009742
779389
Bacillota
TCC
Gly
>WENV170044340
CDYX01005487
779389
Bacillota
TCC
Gly
>WENV170045247
CDYX01033128
466782
Bacillota
CCC
Gly
>WENV170044696
CDYX01015800
466782
Bacillota
CCC
Gly
>WENV170045168
CDYX01030792
179909
Bacillota
GTA
Tyr
>WENV170045624
CDYX01043564
779385
Bacillota
CTG
Gln
>WENV170045476
CDYX01039679
451406
Bacillota
CTT
Lys
>WENV170044938
CDYX01024816
451406
Bacillota
CTT
Lys
>WENV170044772
CDYX01018237
451406
Bacillota
CTT
Lys
>WENV170044892
CDYX01023084
270546
Bacillota
CAT
Met
>WENV170044724
CDYX01017264
451395
Bacillota
GAA
Phe
>WENV170044287
CDYX01004739
451395
Bacillota
GAA
Phe
>WENV170044304
CDYX01005067
467075
Bacillota
TGC
Ala
>WENV170045210
CDYX01031983
466773
Bacillota
GGC
Ala
>WENV170045205
CDYX01031681
451375
Bacillota
GGC
Ala
>WENV170045158
CDYX01030615
451375
Bacillota
GGC
Ala
>WENV170045137
CDYX01029920
451375
Bacillota
GGC
Ala
>WENV170044937
CDYX01024786
451375
Bacillota
GGC
Ala
>WENV170044801
CDYX01019112
451375
Bacillota
GGC
Ala
>WENV170044952
CDYX01025522
270447
Bacillota
GTT
Asn
>WENV170044870
CDYX01022071
270447
Bacillota
GTT
Asn
>WENV170044834
CDYX01020577
270447
Bacillota
GTT
Asn
>WENV170044951
CDYX01025522
653369
Bacillota
CTC
Glu
>WENV170045554
CDYX01041549
451376
Bacillota
GCC
Gly
>WENV170045086
CDYX01028716
451376
Bacillota
GCC
Gly
>WENV170044526
CDYX01010049
451376
Bacillota
GCC
Gly
>WENV170044425
CDYX01007692
451376
Bacillota
GCC
Gly
>WENV170044212
CDYX01002732
451376
Bacillota
GCC
Gly
>WENV170044341
CDYX01005487
458649
Bacillota
GCC
Gly
>WENV170044388
CDYX01006515
451334
Bacillota
TGT
Thr
>WENV170045063
CDYX01027904
270405
Bacillota
ACG
Arg
>WENV170045075
CDYX01028256
284784
Bacillota
GAT
Ile
>WENV170044667
CDYX01014632
285826
Bacillota
CAT
Met
>WENV170044513
CDYX01009742
451372
Bacillota
GAA
Phe
>WENV170044427
CDYX01007733
113007
Bacillota
CAG
Leu
>WENV170044898
CDYX01023468
72675
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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