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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170045259
CDYX01033482
154983
Bacteroidota
GTA
Tyr
>WENV170045506
CDYX01040343
86857
Bacteroidota
TAA
Leu
>WENV170044604
CDYX01012794
281406
Bacteroidota
GGC
Ala
>WENV170045083
CDYX01028672
281406
Bacteroidota
GGC
Ala
>WENV170045309
CDYX01034864
270542
Bacteroidota
CAT
Met
>WENV170045310
CDYX01034864
270542
Bacteroidota
CAT
Met
>WENV170045513
CDYX01040343
270412
Bacteroidota
GTT
Asn
>WENV170045514
CDYX01040343
270412
Bacteroidota
GTT
Asn
>WENV170045515
CDYX01040343
270412
Bacteroidota
GTT
Asn
>WENV170045601
CDYX01043112
451354
Bacteroidota
TTT
Lys
>WENV170044991
CDYX01026322
451354
Bacteroidota
TTT
Lys
>WENV170044693
CDYX01015682
451354
Bacteroidota
TTT
Lys
>WENV170044662
CDYX01014630
451354
Bacteroidota
TTT
Lys
>WENV170044260
CDYX01004019
451354
Bacteroidota
TTT
Lys
>WENV170044215
CDYX01002750
451354
Bacteroidota
TTT
Lys
>WENV170044599
CDYX01012791
654770
Bacteroidota
GGT
Thr
>WENV170045394
CDYX01037425
281835
Bacteroidota
TGT
Thr
>WENV170045537
CDYX01040942
458130
Bacteroidota
TTT
Lys
>WENV170044156
CDYX01001342
653389
Bacteroidota
GGT
Thr
>WENV170044941
CDYX01024898
658239
Bacteroidota
CTC
Glu
>WENV170044869
CDYX01022064
87355
Bacteroidota
TGA
Ser
>WENV170044456
CDYX01008106
87355
Bacteroidota
TGA
Ser
>WENV170045531
CDYX01040683
30278
Bacteroidota
GGA
Ser
>WENV170045461
CDYX01039315
218000
Bacteroidota
CAG
Leu
>WENV170045458
CDYX01039315
218000
Bacteroidota
CAG
Leu
>WENV170044229
CDYX01003316
218000
Bacteroidota
CAG
Leu
>WENV170044226
CDYX01003316
218000
Bacteroidota
CAG
Leu
>WENV170044223
CDYX01003316
218000
Bacteroidota
CAG
Leu
>WENV170045088
CDYX01028726
270492
Bacteroidota
GTG
His
>WENV170044858
CDYX01021475
283437
Bacteroidota
TGT
Thr
>WENV170044136
CDYX01000554
283437
Bacteroidota
TGT
Thr
>WENV170045539
CDYX01040957
451360
Bacteroidota
CGT
Thr
>WENV170045244
CDYX01032877
458644
Bacteroidota
CCC
Gly
>WENV170045508
CDYX01040343
153684
Bacteroidota
GTA
Tyr
>WENV170045398
CDYX01037429
153684
Bacteroidota
GTA
Tyr
>WENV170045269
CDYX01033788
153684
Bacteroidota
GTA
Tyr
>WENV170044217
CDYX01002750
153684
Bacteroidota
GTA
Tyr
>WENV170045522
CDYX01040566
783463
Bacteroidota
CTG
Gln
>WENV170044660
CDYX01014360
783463
Bacteroidota
CTG
Gln
>WENV170044586
CDYX01012451
783463
Bacteroidota
CTG
Gln
>WENV170044274
CDYX01004382
783463
Bacteroidota
CTG
Gln
>WENV170044652
CDYX01014278
273124
Bacteroidota
GTC
Asp
>WENV170044360
CDYX01005821
180313
Bacteroidota
TAG
Leu
>WENV170045255
CDYX01033420
86859
Bacteroidota
TGA
Ser
>WENV170044524
CDYX01009872
86859
Bacteroidota
TGA
Ser
>WENV170044245
CDYX01003694
86859
Bacteroidota
TGA
Ser
>WENV170044243
CDYX01003694
86859
Bacteroidota
TGA
Ser
>WENV170044296
CDYX01005032
270514
Bacteroidota
GTT
Asn
>WENV170044295
CDYX01005032
270514
Bacteroidota
GTT
Asn
>WENV170044989
CDYX01026321
270514
Bacteroidota
GTT
Asn
>WENV170044988
CDYX01026321
270514
Bacteroidota
GTT
Asn
>WENV170044987
CDYX01026321
270514
Bacteroidota
GTT
Asn
>WENV170044297
CDYX01005032
270514
Bacteroidota
GTT
Asn
>WENV170044954
CDYX01025564
451389
Bacteroidota
GCC
Gly
>WENV170044323
CDYX01005086
451389
Bacteroidota
GCC
Gly
>WENV170044322
CDYX01005086
451389
Bacteroidota
GCC
Gly
>WENV170044320
CDYX01005086
451389
Bacteroidota
GCC
Gly
>WENV170044318
CDYX01005086
451389
Bacteroidota
GCC
Gly
>WENV170045425
CDYX01038167
179905
Bacteroidota
TAG
Leu
>WENV170045361
CDYX01036605
660446
Bacteroidota
CCT
Arg
>WENV170044695
CDYX01015799
270418
Bacteroidota
GGC
Ala
>WENV170044132
CDYX01000370
270418
Bacteroidota
GGC
Ala
>WENV170044542
CDYX01010496
451431
Bacteroidota
CCA
Trp
>WENV170045585
CDYX01042763
277204
Bacteroidota
GTC
Asp
>WENV170044998
CDYX01026599
277204
Bacteroidota
GTC
Asp
>WENV170044390
CDYX01006774
240600
Bacteroidota
GGG
Pro
>WENV170044560
CDYX01010792
240600
Bacteroidota
GGG
Pro
>WENV170045381
CDYX01037413
240600
Bacteroidota
GGG
Pro
>WENV170045532
CDYX01040683
240600
Bacteroidota
GGG
Pro
>WENV170045431
CDYX01038439
779393
Bacteroidota
TTG
Gln
>WENV170044719
CDYX01016971
779393
Bacteroidota
TTG
Gln
>WENV170044608
CDYX01012874
779393
Bacteroidota
TTG
Gln
>WENV170044595
CDYX01012767
779393
Bacteroidota
TTG
Gln
>WENV170044950
CDYX01025275
279189
Bacteroidota
GTT
Asn
>WENV170044606
CDYX01012807
279189
Bacteroidota
GTT
Asn
>WENV170044605
CDYX01012807
279189
Bacteroidota
GTT
Asn
>WENV170045599
CDYX01043109
270494
Bacteroidota
CGG
Pro
>WENV170045530
CDYX01040683
782347
Bacteroidota
CTG
Gln
>WENV170044446
CDYX01008031
270471
Bacteroidota
GGC
Ala
>WENV170045549
CDYX01041296
270491
Bacteroidota
GGC
Ala
>WENV170044235
CDYX01003693
270491
Bacteroidota
GGC
Ala
>WENV170045154
CDYX01030587
241460
Bacteroidota
TAC
Val
>WENV170045153
CDYX01030587
241460
Bacteroidota
TAC
Val
>WENV170044828
CDYX01020076
241460
Bacteroidota
TAC
Val
>WENV170044827
CDYX01020076
241460
Bacteroidota
TAC
Val
>WENV170044826
CDYX01020076
241460
Bacteroidota
TAC
Val
>WENV170045516
CDYX01040343
653343
Bacteroidota
CCT
Arg
>WENV170044866
CDYX01021784
653343
Bacteroidota
CCT
Arg
>WENV170044601
CDYX01012791
30567
Bacteroidota
GGA
Ser
>WENV170044697
CDYX01015803
463028
Bacteroidota
CAT
Met
>WENV170044282
CDYX01004730
463028
Bacteroidota
CAT
Met
>WENV170045072
CDYX01028029
463028
Bacteroidota
CAT
Met
>WENV170045295
CDYX01034507
463028
Bacteroidota
CAT
Met
>WENV170045243
CDYX01032877
653774
Bacteroidota
CAT
Met
>WENV170045216
CDYX01032100
653774
Bacteroidota
CAT
Met
>WENV170045000
CDYX01026599
153692
Bacteroidota
GTA
Tyr
>WENV170044139
CDYX01000593
153692
Bacteroidota
GTA
Tyr
>WENV170045209
CDYX01031720
270851
Bacteroidota
TCT
Arg
>WENV170044188
CDYX01002077
30277
Bacteroidota
GGA
Ser
>WENV170044538
CDYX01010496
467914
Bacteroidota
GCC
Gly
>WENV170045452
CDYX01039310
467914
Bacteroidota
GCC
Gly
>WENV170045148
CDYX01030366
653377
Bacteroidota
CTC
Glu
>WENV170045065
CDYX01027940
653377
Bacteroidota
CTC
Glu
>WENV170045603
CDYX01043112
653350
Bacteroidota
GCA
Cys
>WENV170045266
CDYX01033715
653350
Bacteroidota
GCA
Cys
>WENV170044484
CDYX01009088
653350
Bacteroidota
GCA
Cys
>WENV170044369
CDYX01006138
653350
Bacteroidota
GCA
Cys
>WENV170045538
CDYX01040957
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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