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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170047283
CDYZ01023700
457039
Bacillota
GAA
Phe
>WENV170047336
CDYZ01027695
270436
Bacillota
GTG
His
>WENV170047767
CDYZ01054192
655659
Bacillota
CTG
Gln
>WENV170046908
CDYZ01005289
465106
Bacillota
TGT
Thr
>WENV170047457
CDYZ01033999
465106
Bacillota
TGT
Thr
>WENV170047633
CDYZ01045531
465106
Bacillota
TGT
Thr
>WENV170047936
CDYZ01062827
465106
Bacillota
TGT
Thr
>WENV170047968
CDYZ01064310
285831
Bacillota
GTC
Asp
>WENV170047338
CDYZ01027695
451373
Bacillota
TTT
Lys
>WENV170048132
CDYZ01072309
270426
Bacillota
GAT
Ile
>WENV170047975
CDYZ01064352
270426
Bacillota
GAT
Ile
>WENV170047750
CDYZ01052859
270426
Bacillota
GAT
Ile
>WENV170047263
CDYZ01022047
270426
Bacillota
GAT
Ile
>WENV170047123
CDYZ01015064
270426
Bacillota
GAT
Ile
>WENV170047954
CDYZ01063467
780499
Bacillota
GCA
Cys
>WENV170047270
CDYZ01023059
451367
Bacillota
TAC
Val
>WENV170047761
CDYZ01054107
468336
Bacillota
GCC
Gly
>WENV170047205
CDYZ01018840
72851
Bacillota
TGA
Ser
>WENV170047924
CDYZ01062649
88702
Bacillota
CAG
Leu
>WENV170047444
CDYZ01033436
88702
Bacillota
CAG
Leu
>WENV170047443
CDYZ01033436
88702
Bacillota
CAG
Leu
>WENV170047471
CDYZ01034782
86865
Bacillota
AAG
Leu
>WENV170046970
CDYZ01006930
86865
Bacillota
AAG
Leu
>WENV170048013
CDYZ01065993
779389
Bacillota
TCC
Gly
>WENV170048006
CDYZ01065547
779389
Bacillota
TCC
Gly
>WENV170047284
CDYZ01023700
779389
Bacillota
TCC
Gly
>WENV170047895
CDYZ01061135
179909
Bacillota
GTA
Tyr
>WENV170047200
CDYZ01018693
451357
Bacillota
CTT
Lys
>WENV170047611
CDYZ01043732
451414
Bacillota
TGC
Ala
>WENV170047868
CDYZ01059789
451375
Bacillota
GGC
Ala
>WENV170047842
CDYZ01058170
451375
Bacillota
GGC
Ala
>WENV170047606
CDYZ01043069
451375
Bacillota
GGC
Ala
>WENV170047536
CDYZ01038221
451375
Bacillota
GGC
Ala
>WENV170047237
CDYZ01020453
451375
Bacillota
GGC
Ala
>WENV170047171
CDYZ01016984
451375
Bacillota
GGC
Ala
>WENV170047573
CDYZ01041035
113007
Bacillota
CAG
Leu
>WENV170046901
CDYZ01004967
113007
Bacillota
CAG
Leu
>WENV170046862
CDYZ01001875
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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