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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170048609
CDZA01021225
275613
Bacillota
GTG
His
>WENV170048477
CDZA01016150
653346
Bacillota
TTC
Glu
>WENV170048165
CDZA01000341
86860
Bacillota
TGA
Ser
>WENV170049265
CDZA01053568
86860
Bacillota
TGA
Ser
>WENV170049553
CDZA01069422
779387
Bacillota
TTG
Gln
>WENV170048700
CDZA01025826
465106
Bacillota
TGT
Thr
>WENV170049111
CDZA01045982
465106
Bacillota
TGT
Thr
>WENV170049531
CDZA01067722
465106
Bacillota
TGT
Thr
>WENV170049091
CDZA01045185
285831
Bacillota
GTC
Asp
>WENV170049654
CDZA01074034
460662
Bacillota
GCC
Gly
>WENV170049603
CDZA01072068
270426
Bacillota
GAT
Ile
>WENV170049563
CDZA01070219
270426
Bacillota
GAT
Ile
>WENV170049555
CDZA01069520
270426
Bacillota
GAT
Ile
>WENV170049083
CDZA01045013
270426
Bacillota
GAT
Ile
>WENV170048365
CDZA01009287
270426
Bacillota
GAT
Ile
>WENV170049679
CDZA01075807
451355
Bacillota
GAC
Val
>WENV170049441
CDZA01062766
279224
Bacillota
GAT
Ile
>WENV170049093
CDZA01045185
468336
Bacillota
GCC
Gly
>WENV170048286
CDZA01005783
468336
Bacillota
GCC
Gly
>WENV170049536
CDZA01068330
72851
Bacillota
TGA
Ser
>WENV170049077
CDZA01044904
270438
Bacillota
TCT
Arg
>WENV170048948
CDZA01038473
270438
Bacillota
TCT
Arg
>WENV170048854
CDZA01033149
451352
Bacillota
GGT
Thr
>WENV170048337
CDZA01007502
451352
Bacillota
GGT
Thr
>WENV170049107
CDZA01045899
275959
Bacillota
CAT
Met
>WENV170049082
CDZA01045013
467963
Bacillota
TGC
Ala
>WENV170049145
CDZA01047549
88702
Bacillota
CAG
Leu
>WENV170049144
CDZA01047549
88702
Bacillota
CAG
Leu
>WENV170049665
CDZA01074760
779389
Bacillota
TCC
Gly
>WENV170049641
CDZA01073507
779389
Bacillota
TCC
Gly
>WENV170049625
CDZA01072846
779389
Bacillota
TCC
Gly
>WENV170049158
CDZA01048209
779389
Bacillota
TCC
Gly
>WENV170048608
CDZA01021225
275792
Bacillota
TCT
Arg
>WENV170049033
CDZA01042486
287917
Bacillota
GAT
Ile
>WENV170048787
CDZA01030163
282769
Bacillota
CAT
Met
>WENV170048535
CDZA01018685
451414
Bacillota
TGC
Ala
>WENV170049364
CDZA01058986
20504
Bacillota
GGA
Ser
>WENV170048401
CDZA01011645
451384
Bacillota
TGG
Pro
>WENV170049734
CDZA01078146
451375
Bacillota
GGC
Ala
>WENV170048380
CDZA01009957
451375
Bacillota
GGC
Ala
>WENV170048280
CDZA01005642
451375
Bacillota
GGC
Ala
>WENV170048232
CDZA01003120
451375
Bacillota
GGC
Ala
>WENV170049104
CDZA01045899
457194
Bacillota
TAC
Val
>WENV170048204
CDZA01002003
457194
Bacillota
TAC
Val
>WENV170049293
CDZA01054797
270405
Bacillota
ACG
Arg
>WENV170048478
CDZA01016155
270405
Bacillota
ACG
Arg
>WENV170048677
CDZA01024323
284784
Bacillota
GAT
Ile
>WENV170048405
CDZA01011781
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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