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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170051353
CDZB01065779
180100
Actinomycetota
GTA
Tyr
>WENV170051774
CDZB01081861
451412
Actinomycetota
GTT
Asn
>WENV170051017
CDZB01052138
451381
Actinomycetota
CGT
Thr
>WENV170049997
CDZB01009972
451359
Actinomycetota
TTT
Lys
>WENV170050333
CDZB01022701
451442
Actinomycetota
GGC
Ala
>WENV170051599
CDZB01075527
270467
Actinomycetota
TGG
Pro
>WENV170050676
CDZB01036767
86856
Actinomycetota
TGA
Ser
>WENV170051018
CDZB01052138
217997
Actinomycetota
TAG
Leu
>WENV170050394
CDZB01024182
653368
Actinomycetota
CTG
Gln
>WENV170049981
CDZB01009627
270417
Actinomycetota
CAA
Leu
>WENV170051333
CDZB01064636
270403
Actinomycetota
TGT
Thr
>WENV170050999
CDZB01051129
72674
Actinomycetota
CGA
Ser
>WENV170049856
CDZB01003988
153767
Actinomycetota
CAG
Leu
>WENV170051356
CDZB01065798
277197
Actinomycetota
CAT
Met
>WENV170050332
CDZB01022701
451443
Actinomycetota
TGC
Ala
>WENV170050393
CDZB01024182
451402
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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