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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170049850
CDZB01003853
457039
Bacillota
GAA
Phe
>WENV170050145
CDZB01015683
457039
Bacillota
GAA
Phe
>WENV170049884
CDZB01005838
468330
Bacillota
GTT
Asn
>WENV170051622
CDZB01075844
270436
Bacillota
GTG
His
>WENV170050519
CDZB01030480
465106
Bacillota
TGT
Thr
>WENV170050915
CDZB01047974
465106
Bacillota
TGT
Thr
>WENV170051187
CDZB01058140
465106
Bacillota
TGT
Thr
>WENV170051509
CDZB01071512
465106
Bacillota
TGT
Thr
>WENV170050549
CDZB01031780
285831
Bacillota
GTC
Asp
>WENV170051361
CDZB01066241
270426
Bacillota
GAT
Ile
>WENV170051166
CDZB01057428
270426
Bacillota
GAT
Ile
>WENV170050551
CDZB01031801
270426
Bacillota
GAT
Ile
>WENV170050170
CDZB01016895
270426
Bacillota
GAT
Ile
>WENV170049788
CDZB01000613
270426
Bacillota
GAT
Ile
>WENV170051601
CDZB01075764
451367
Bacillota
TAC
Val
>WENV170051416
CDZB01067595
451367
Bacillota
TAC
Val
>WENV170050258
CDZB01020505
468336
Bacillota
GCC
Gly
>WENV170050469
CDZB01027846
275959
Bacillota
CAT
Met
>WENV170050169
CDZB01016895
467963
Bacillota
TGC
Ala
>WENV170050740
CDZB01040215
88702
Bacillota
CAG
Leu
>WENV170050730
CDZB01039327
86865
Bacillota
AAG
Leu
>WENV170051620
CDZB01075844
779389
Bacillota
TCC
Gly
>WENV170050773
CDZB01041501
779389
Bacillota
TCC
Gly
>WENV170050413
CDZB01025285
779389
Bacillota
TCC
Gly
>WENV170049874
CDZB01005177
779389
Bacillota
TCC
Gly
>WENV170049851
CDZB01003853
779389
Bacillota
TCC
Gly
>WENV170051621
CDZB01075844
275792
Bacillota
TCT
Arg
>WENV170050830
CDZB01044293
287917
Bacillota
GAT
Ile
>WENV170050140
CDZB01015683
270421
Bacillota
GTC
Asp
>WENV170051670
CDZB01077647
466782
Bacillota
CCC
Gly
>WENV170050093
CDZB01013823
179909
Bacillota
GTA
Tyr
>WENV170050242
CDZB01019597
73357
Bacillota
TGA
Ser
>WENV170051570
CDZB01073694
467075
Bacillota
TGC
Ala
>WENV170050818
CDZB01044027
467075
Bacillota
TGC
Ala
>WENV170051318
CDZB01064032
451375
Bacillota
GGC
Ala
>WENV170051051
CDZB01053181
451375
Bacillota
GGC
Ala
>WENV170050709
CDZB01038499
451375
Bacillota
GGC
Ala
>WENV170049951
CDZB01007896
451375
Bacillota
GGC
Ala
>WENV170049873
CDZB01005164
457194
Bacillota
TAC
Val
>WENV170051500
CDZB01070945
451334
Bacillota
TGT
Thr
>WENV170049999
CDZB01010478
454988
Bacillota
TGC
Ala
>WENV170050262
CDZB01020812
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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