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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170052061
CDZC01007988
451336
Bacillota
GAA
Phe
>WENV170052187
CDZC01011770
451336
Bacillota
GAA
Phe
>WENV170052749
CDZC01027391
275710
Bacillota
CCG
Arg
>WENV170052854
CDZC01030801
275710
Bacillota
CCG
Arg
>WENV170051813
CDZC01000304
270416
Bacillota
CAC
Val
>WENV170051975
CDZC01005521
455828
Bacillota
TAC
Val
>WENV170052108
CDZC01009580
455828
Bacillota
TAC
Val
>WENV170052543
CDZC01021314
455828
Bacillota
TAC
Val
>WENV170052853
CDZC01030801
653346
Bacillota
TTC
Glu
>WENV170052012
CDZC01006994
467910
Bacillota
TGC
Ala
>WENV170052235
CDZC01013236
86860
Bacillota
TGA
Ser
>WENV170052236
CDZC01013236
8223
Bacillota
GCT
Ser
>WENV170051865
CDZC01001398
779387
Bacillota
TTG
Gln
>WENV170052140
CDZC01010337
466790
Bacillota
CGG
Pro
>WENV170052563
CDZC01021567
460662
Bacillota
GCC
Gly
>WENV170052302
CDZC01015118
460662
Bacillota
GCC
Gly
>WENV170052628
CDZC01022927
659884
Bacillota
CTG
Gln
>WENV170052627
CDZC01022927
659884
Bacillota
CTG
Gln
>WENV170052626
CDZC01022927
659884
Bacillota
CTG
Gln
>WENV170052063
CDZC01008222
270426
Bacillota
GAT
Ile
>WENV170051876
CDZC01002089
270426
Bacillota
GAT
Ile
>WENV170052933
CDZC01032215
451355
Bacillota
GAC
Val
>WENV170052669
CDZC01024330
451355
Bacillota
GAC
Val
>WENV170052059
CDZC01007988
451377
Bacillota
TAC
Val
>WENV170052011
CDZC01006994
279224
Bacillota
GAT
Ile
>WENV170052785
CDZC01028152
468336
Bacillota
GCC
Gly
>WENV170052795
CDZC01028197
112978
Bacillota
AAG
Leu
>WENV170052908
CDZC01031910
661851
Bacillota
GCA
Cys
>WENV170052319
CDZC01015401
72851
Bacillota
TGA
Ser
>WENV170052843
CDZC01030510
270438
Bacillota
TCT
Arg
>WENV170052793
CDZC01028195
451352
Bacillota
GGT
Thr
>WENV170052792
CDZC01028195
451352
Bacillota
GGT
Thr
>WENV170051875
CDZC01002089
467963
Bacillota
TGC
Ala
>WENV170051970
CDZC01005521
455831
Bacillota
GTT
Asn
>WENV170052977
CDZC01033379
112239
Bacillota
CAG
Leu
>WENV170051864
CDZC01001324
112239
Bacillota
CAG
Leu
>WENV170052910
CDZC01031917
153689
Bacillota
GTA
Tyr
>WENV170052909
CDZC01031910
153689
Bacillota
GTA
Tyr
>WENV170052806
CDZC01029156
653349
Bacillota
GCC
Gly
>WENV170052624
CDZC01022927
653349
Bacillota
GCC
Gly
>WENV170051966
CDZC01005304
653349
Bacillota
GCC
Gly
>WENV170052702
CDZC01025663
779389
Bacillota
TCC
Gly
>WENV170052906
CDZC01031910
284668
Bacillota
GTC
Asp
>WENV170052904
CDZC01031910
284668
Bacillota
GTC
Asp
>WENV170052791
CDZC01028195
284668
Bacillota
GTC
Asp
>WENV170052189
CDZC01011770
284668
Bacillota
GTC
Asp
>WENV170052060
CDZC01007988
284668
Bacillota
GTC
Asp
>WENV170052509
CDZC01020201
653398
Bacillota
CTC
Glu
>WENV170051844
CDZC01000854
653398
Bacillota
CTC
Glu
>WENV170051843
CDZC01000854
653398
Bacillota
CTC
Glu
>WENV170052453
CDZC01018495
466782
Bacillota
CCC
Gly
>WENV170052642
CDZC01023526
779385
Bacillota
CTG
Gln
>WENV170052139
CDZC01010337
779385
Bacillota
CTG
Gln
>WENV170052748
CDZC01027353
451357
Bacillota
CTT
Lys
>WENV170052705
CDZC01025827
451357
Bacillota
CTT
Lys
>WENV170052545
CDZC01021314
270518
Bacillota
CAT
Met
>WENV170052852
CDZC01030801
270546
Bacillota
CAT
Met
>WENV170052064
CDZC01008231
270546
Bacillota
CAT
Met
>WENV170052719
CDZC01026456
20504
Bacillota
GGA
Ser
>WENV170051866
CDZC01001399
451384
Bacillota
TGG
Pro
>WENV170052881
CDZC01031421
466773
Bacillota
GGC
Ala
>WENV170052366
CDZC01016545
466773
Bacillota
GGC
Ala
>WENV170051971
CDZC01005521
653354
Bacillota
TTC
Glu
>WENV170052757
CDZC01027576
451375
Bacillota
GGC
Ala
>WENV170052755
CDZC01027576
451375
Bacillota
GGC
Ala
>WENV170052781
CDZC01027910
270447
Bacillota
GTT
Asn
>WENV170052365
CDZC01016545
270447
Bacillota
GTT
Asn
>WENV170052780
CDZC01027910
653369
Bacillota
CTC
Glu
>WENV170052747
CDZC01027353
653369
Bacillota
CTC
Glu
>WENV170052946
CDZC01032719
270399
Bacillota
GAT
Ile
>WENV170052907
CDZC01031910
451376
Bacillota
GCC
Gly
>WENV170052905
CDZC01031910
451376
Bacillota
GCC
Gly
>WENV170052188
CDZC01011770
451376
Bacillota
GCC
Gly
>WENV170052062
CDZC01007988
451376
Bacillota
GCC
Gly
>WENV170052058
CDZC01007988
451376
Bacillota
GCC
Gly
>WENV170052945
CDZC01032719
451344
Bacillota
TGC
Ala
>WENV170052278
CDZC01014386
653347
Bacillota
TGT
Thr
>WENV170052308
CDZC01015391
270405
Bacillota
ACG
Arg
>WENV170052184
CDZC01011744
780500
Bacillota
CCA
Trp
>WENV170052307
CDZC01015365
284784
Bacillota
GAT
Ile
>WENV170052768
CDZC01027877
658259
Bacillota
CTC
Glu
>WENV170052014
CDZC01006994
658259
Bacillota
CTC
Glu
>WENV170052375
CDZC01016554
285826
Bacillota
CAT
Met
>WENV170052360
CDZC01016294
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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