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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170054980
CDZE01037763
458652
Bacillota
GCC
Gly
>WENV170054088
CDZE01004689
275613
Bacillota
GTG
His
>WENV170054115
CDZE01005413
275710
Bacillota
CCG
Arg
>WENV170054285
CDZE01011932
275710
Bacillota
CCG
Arg
>WENV170054337
CDZE01013440
270416
Bacillota
CAC
Val
>WENV170054469
CDZE01018624
270416
Bacillota
CAC
Val
>WENV170054201
CDZE01009600
653346
Bacillota
TTC
Glu
>WENV170055252
CDZE01047749
653346
Bacillota
TTC
Glu
>WENV170054857
CDZE01033266
270436
Bacillota
GTG
His
>WENV170055067
CDZE01040743
86860
Bacillota
TGA
Ser
>WENV170053999
CDZE01001113
86860
Bacillota
TGA
Ser
>WENV170055068
CDZE01040743
8223
Bacillota
GCT
Ser
>WENV170054000
CDZE01001113
8223
Bacillota
GCT
Ser
>WENV170053983
CDZE01000457
8223
Bacillota
GCT
Ser
>WENV170054831
CDZE01031862
779387
Bacillota
TTG
Gln
>WENV170054591
CDZE01022650
779387
Bacillota
TTG
Gln
>WENV170055175
CDZE01045788
655659
Bacillota
CTG
Gln
>WENV170053994
CDZE01000848
465106
Bacillota
TGT
Thr
>WENV170055060
CDZE01040398
285831
Bacillota
GTC
Asp
>WENV170054137
CDZE01007266
285831
Bacillota
GTC
Asp
>WENV170054917
CDZE01035681
466790
Bacillota
CGG
Pro
>WENV170054518
CDZE01020653
466790
Bacillota
CGG
Pro
>WENV170055029
CDZE01039243
451373
Bacillota
TTT
Lys
>WENV170055011
CDZE01038790
270426
Bacillota
GAT
Ile
>WENV170054485
CDZE01019313
270426
Bacillota
GAT
Ile
>WENV170054287
CDZE01012252
270426
Bacillota
GAT
Ile
>WENV170054979
CDZE01037763
451367
Bacillota
TAC
Val
>WENV170054510
CDZE01020282
451367
Bacillota
TAC
Val
>WENV170054409
CDZE01015562
451367
Bacillota
TAC
Val
>WENV170054251
CDZE01010954
451367
Bacillota
TAC
Val
>WENV170055019
CDZE01038821
451367
Bacillota
TAC
Val
>WENV170054795
CDZE01030716
451355
Bacillota
GAC
Val
>WENV170055036
CDZE01039647
451377
Bacillota
TAC
Val
>WENV170055108
CDZE01042426
653367
Bacillota
CTC
Glu
>WENV170054610
CDZE01023811
653367
Bacillota
CTC
Glu
>WENV170054139
CDZE01007266
468336
Bacillota
GCC
Gly
>WENV170054063
CDZE01003568
468336
Bacillota
GCC
Gly
>WENV170055100
CDZE01042028
661851
Bacillota
GCA
Cys
>WENV170054312
CDZE01013025
661851
Bacillota
GCA
Cys
>WENV170054663
CDZE01025540
270438
Bacillota
TCT
Arg
>WENV170054047
CDZE01003131
270438
Bacillota
TCT
Arg
>WENV170054680
CDZE01026286
451352
Bacillota
GGT
Thr
>WENV170054679
CDZE01026286
451352
Bacillota
GGT
Thr
>WENV170054094
CDZE01004945
451352
Bacillota
GGT
Thr
>WENV170055010
CDZE01038790
467963
Bacillota
TGC
Ala
>WENV170054988
CDZE01037865
112239
Bacillota
CAG
Leu
>WENV170054049
CDZE01003131
112239
Bacillota
CAG
Leu
>WENV170054073
CDZE01004264
88702
Bacillota
CAG
Leu
>WENV170054072
CDZE01004264
88702
Bacillota
CAG
Leu
>WENV170054512
CDZE01020282
465093
Bacillota
GCC
Gly
>WENV170054412
CDZE01015562
465093
Bacillota
GCC
Gly
>WENV170054447
CDZE01017055
86865
Bacillota
AAG
Leu
>WENV170054855
CDZE01033266
779389
Bacillota
TCC
Gly
>WENV170054944
CDZE01036697
779389
Bacillota
TCC
Gly
>WENV170055046
CDZE01040266
779389
Bacillota
TCC
Gly
>WENV170055133
CDZE01043612
779389
Bacillota
TCC
Gly
>WENV170054087
CDZE01004689
275792
Bacillota
TCT
Arg
>WENV170054261
CDZE01011391
452811
Bacillota
TGC
Ala
>WENV170054969
CDZE01037576
284668
Bacillota
GTC
Asp
>WENV170054678
CDZE01026286
284668
Bacillota
GTC
Asp
>WENV170055136
CDZE01043882
466782
Bacillota
CCC
Gly
>WENV170054095
CDZE01004963
466782
Bacillota
CCC
Gly
>WENV170054832
CDZE01031885
179909
Bacillota
GTA
Tyr
>WENV170054916
CDZE01035681
779385
Bacillota
CTG
Gln
>WENV170054517
CDZE01020653
779385
Bacillota
CTG
Gln
>WENV170054514
CDZE01020416
779385
Bacillota
CTG
Gln
>WENV170054377
CDZE01014715
779385
Bacillota
CTG
Gln
>WENV170055228
CDZE01047004
451406
Bacillota
CTT
Lys
>WENV170055253
CDZE01047794
451414
Bacillota
TGC
Ala
>WENV170055251
CDZE01047749
270546
Bacillota
CAT
Met
>WENV170054903
CDZE01035157
20504
Bacillota
GGA
Ser
>WENV170055127
CDZE01043557
451384
Bacillota
TGG
Pro
>WENV170054345
CDZE01013975
451384
Bacillota
TGG
Pro
>WENV170055020
CDZE01038838
466773
Bacillota
GGC
Ala
>WENV170054692
CDZE01026950
466773
Bacillota
GGC
Ala
>WENV170054068
CDZE01004175
466773
Bacillota
GGC
Ala
>WENV170055121
CDZE01043041
270447
Bacillota
GTT
Asn
>WENV170054791
CDZE01030637
270447
Bacillota
GTT
Asn
>WENV170054477
CDZE01019012
270447
Bacillota
GTT
Asn
>WENV170054198
CDZE01009217
270447
Bacillota
GTT
Asn
>WENV170054521
CDZE01020726
653369
Bacillota
CTC
Glu
>WENV170054476
CDZE01019012
653369
Bacillota
CTC
Glu
>WENV170055122
CDZE01043089
451376
Bacillota
GCC
Gly
>WENV170055035
CDZE01039647
451376
Bacillota
GCC
Gly
>WENV170054673
CDZE01026108
451376
Bacillota
GCC
Gly
>WENV170054311
CDZE01013025
451376
Bacillota
GCC
Gly
>WENV170054105
CDZE01005226
451376
Bacillota
GCC
Gly
>WENV170054052
CDZE01003205
451376
Bacillota
GCC
Gly
>WENV170054344
CDZE01013866
457194
Bacillota
TAC
Val
>WENV170054949
CDZE01037306
653347
Bacillota
TGT
Thr
>WENV170054915
CDZE01035518
270405
Bacillota
ACG
Arg
>WENV170054559
CDZE01021560
270405
Bacillota
ACG
Arg
>WENV170054229
CDZE01010374
454988
Bacillota
TGC
Ala
>WENV170054884
CDZE01034025
284784
Bacillota
GAT
Ile
>WENV170054212
CDZE01009977
285826
Bacillota
CAT
Met
>WENV170054943
CDZE01036697
451372
Bacillota
GAA
Phe
>WENV170054036
CDZE01002234
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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