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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170056194
CDZF01039967
86857
Bacteroidota
TAA
Leu
>WENV170056032
CDZF01032647
470605
Bacteroidota
GAA
Phe
>WENV170056292
CDZF01044641
780666
Bacteroidota
CTG
Gln
>WENV170055669
CDZF01015334
779477
Bacteroidota
TTG
Gln
>WENV170056024
CDZF01032237
281406
Bacteroidota
GGC
Ala
>WENV170056189
CDZF01039952
281406
Bacteroidota
GGC
Ala
>WENV170055993
CDZF01031027
270412
Bacteroidota
GTT
Asn
>WENV170055992
CDZF01031027
270412
Bacteroidota
GTT
Asn
>WENV170055888
CDZF01025446
451354
Bacteroidota
TTT
Lys
>WENV170055822
CDZF01022497
451354
Bacteroidota
TTT
Lys
>WENV170055999
CDZF01031218
281835
Bacteroidota
TGT
Thr
>WENV170055995
CDZF01031034
458130
Bacteroidota
TTT
Lys
>WENV170055385
CDZF01004327
653389
Bacteroidota
GGT
Thr
>WENV170055663
CDZF01014907
658239
Bacteroidota
CTC
Glu
>WENV170056102
CDZF01036876
270492
Bacteroidota
GTG
His
>WENV170055383
CDZF01004327
283437
Bacteroidota
TGT
Thr
>WENV170055303
CDZF01001231
283437
Bacteroidota
TGT
Thr
>WENV170056138
CDZF01038131
783463
Bacteroidota
CTG
Gln
>WENV170055476
CDZF01006909
783463
Bacteroidota
CTG
Gln
>WENV170056320
CDZF01045916
113161
Bacteroidota
GAG
Leu
>WENV170056348
CDZF01047088
273124
Bacteroidota
GTC
Asp
>WENV170055731
CDZF01018284
273124
Bacteroidota
GTC
Asp
>WENV170056346
CDZF01047086
273124
Bacteroidota
GTC
Asp
>WENV170055708
CDZF01016854
86859
Bacteroidota
TGA
Ser
>WENV170055435
CDZF01005547
86859
Bacteroidota
TGA
Ser
>WENV170055958
CDZF01029782
270418
Bacteroidota
GGC
Ala
>WENV170055666
CDZF01014979
451431
Bacteroidota
CCA
Trp
>WENV170055742
CDZF01018784
72680
Bacteroidota
TAA
Leu
>WENV170055524
CDZF01008492
240600
Bacteroidota
GGG
Pro
>WENV170055922
CDZF01028199
240600
Bacteroidota
GGG
Pro
>WENV170056096
CDZF01036741
240600
Bacteroidota
GGG
Pro
>WENV170055288
CDZF01000239
270471
Bacteroidota
GGC
Ala
>WENV170056214
CDZF01040753
241460
Bacteroidota
TAC
Val
>WENV170056213
CDZF01040753
241460
Bacteroidota
TAC
Val
>WENV170056212
CDZF01040753
241460
Bacteroidota
TAC
Val
>WENV170056256
CDZF01043168
451484
Bacteroidota
CAT
Met
>WENV170055977
CDZF01030604
653343
Bacteroidota
CCT
Arg
>WENV170056319
CDZF01045916
180807
Bacteroidota
CAG
Leu
>WENV170056131
CDZF01037800
463028
Bacteroidota
CAT
Met
>WENV170055948
CDZF01028717
463028
Bacteroidota
CAT
Met
>WENV170055693
CDZF01016451
463028
Bacteroidota
CAT
Met
>WENV170055969
CDZF01030176
653377
Bacteroidota
CTC
Glu
>WENV170055391
CDZF01004416
653350
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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