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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170058015
CDZG01059956
654879
Bacteroidota
GGT
Thr
>WENV170056529
CDZG01006420
780666
Bacteroidota
CTG
Gln
>WENV170056530
CDZG01006420
780666
Bacteroidota
CTG
Gln
>WENV170056531
CDZG01006420
780666
Bacteroidota
CTG
Gln
>WENV170056532
CDZG01006420
780666
Bacteroidota
CTG
Gln
>WENV170056589
CDZG01007560
87218
Bacteroidota
TGA
Ser
>WENV170057546
CDZG01041532
87218
Bacteroidota
TGA
Ser
>WENV170056697
CDZG01012058
281406
Bacteroidota
GGC
Ala
>WENV170056726
CDZG01013208
281406
Bacteroidota
GGC
Ala
>WENV170058076
CDZG01062817
270542
Bacteroidota
CAT
Met
>WENV170058077
CDZG01062817
270542
Bacteroidota
CAT
Met
>WENV170056671
CDZG01010587
270412
Bacteroidota
GTT
Asn
>WENV170057280
CDZG01032272
451354
Bacteroidota
TTT
Lys
>WENV170058107
CDZG01063346
658239
Bacteroidota
CTC
Glu
>WENV170056690
CDZG01011624
87355
Bacteroidota
TGA
Ser
>WENV170057856
CDZG01054181
30278
Bacteroidota
GGA
Ser
>WENV170057997
CDZG01059893
270492
Bacteroidota
GTG
His
>WENV170057981
CDZG01059007
270492
Bacteroidota
GTG
His
>WENV170057626
CDZG01044622
270492
Bacteroidota
GTG
His
>WENV170056843
CDZG01017289
283437
Bacteroidota
TGT
Thr
>WENV170057802
CDZG01051914
451360
Bacteroidota
CGT
Thr
>WENV170056834
CDZG01016778
113008
Bacteroidota
GAG
Leu
>WENV170057400
CDZG01037387
153684
Bacteroidota
GTA
Tyr
>WENV170056912
CDZG01019369
783463
Bacteroidota
CTG
Gln
>WENV170056744
CDZG01014159
783463
Bacteroidota
CTG
Gln
>WENV170057695
CDZG01047259
273124
Bacteroidota
GTC
Asp
>WENV170056483
CDZG01002956
180313
Bacteroidota
TAG
Leu
>WENV170058133
CDZG01063903
86859
Bacteroidota
TGA
Ser
>WENV170057865
CDZG01054188
86859
Bacteroidota
TGA
Ser
>WENV170056918
CDZG01019452
270514
Bacteroidota
GTT
Asn
>WENV170057323
CDZG01033845
273900
Bacteroidota
GTC
Asp
>WENV170057322
CDZG01033845
273900
Bacteroidota
GTC
Asp
>WENV170057321
CDZG01033845
273900
Bacteroidota
GTC
Asp
>WENV170057320
CDZG01033845
273900
Bacteroidota
GTC
Asp
>WENV170056507
CDZG01004847
451389
Bacteroidota
GCC
Gly
>WENV170057531
CDZG01041129
179905
Bacteroidota
TAG
Leu
>WENV170057850
CDZG01053659
656020
Bacteroidota
>WENV170056600
CDZG01007987
656020
Bacteroidota
>WENV170056749
CDZG01014180
72680
Bacteroidota
TAA
Leu
>WENV170057719
CDZG01048220
277204
Bacteroidota
GTC
Asp
>WENV170056579
CDZG01007495
779393
Bacteroidota
TTG
Gln
>WENV170056571
CDZG01007477
779393
Bacteroidota
TTG
Gln
>WENV170056538
CDZG01006432
270494
Bacteroidota
CGG
Pro
>WENV170057193
CDZG01028705
451484
Bacteroidota
CAT
Met
>WENV170057690
CDZG01046738
463028
Bacteroidota
CAT
Met
>WENV170057156
CDZG01027657
463028
Bacteroidota
CAT
Met
>WENV170057053
CDZG01024593
463028
Bacteroidota
CAT
Met
>WENV170057270
CDZG01031943
153692
Bacteroidota
GTA
Tyr
>WENV170056751
CDZG01014180
780665
Bacteroidota
TTG
Gln
>WENV170056824
CDZG01016283
270851
Bacteroidota
TCT
Arg
>WENV170056612
CDZG01008155
30277
Bacteroidota
GGA
Ser
>WENV170057074
CDZG01025632
180504
Bacteroidota
CAA
Leu
>WENV170058016
CDZG01059956
456408
Bacteroidota
CCA
Trp
>WENV170056815
CDZG01015747
653350
Bacteroidota
GCA
Cys
>WENV170057404
CDZG01037520
653350
Bacteroidota
GCA
Cys
>WENV170058033
CDZG01060857
653350
Bacteroidota
GCA
Cys
>WENV170056474
CDZG01002472
660260
Bacteroidota
CTC
Glu
>WENV170056473
CDZG01002472
660260
Bacteroidota
CTC
Glu
>WENV170056472
CDZG01002472
660260
Bacteroidota
CTC
Glu
>WENV170056471
CDZG01002472
660260
Bacteroidota
CTC
Glu
>WENV170056470
CDZG01002472
660260
Bacteroidota
CTC
Glu
>WENV170056422
CDZG01000878
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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