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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170057658
CDZG01045240
270446
Thermodesulfobacteriota
GGG
Pro
>WENV170057700
CDZG01047473
270446
Thermodesulfobacteriota
GGG
Pro
>WENV170057521
CDZG01041007
156076
Thermodesulfobacteriota
GTA
Tyr
>WENV170057260
CDZG01031386
471987
Thermodesulfobacteriota
CTT
Lys
>WENV170057259
CDZG01031340
471981
Thermodesulfobacteriota
GGC
Ala
>WENV170057355
CDZG01034937
285948
Thermodesulfobacteriota
GTC
Asp
>WENV170057522
CDZG01041007
474979
Thermodesulfobacteriota
TCC
Gly
>WENV170057795
CDZG01051475
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170057574
CDZG01042538
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170057435
CDZG01038682
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170056743
CDZG01014152
288741
Thermodesulfobacteriota
TTC
Glu
>WENV170057576
CDZG01043000
284595
Thermodesulfobacteriota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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