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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170058054
CDZG01061823
468335
Verrucomicrobiota
CCA
Trp
>WENV170056851
CDZG01017295
469002
Verrucomicrobiota
CGC
Ala
>WENV170058043
CDZG01061318
468342
Verrucomicrobiota
>WENV170058039
CDZG01061318
228818
Verrucomicrobiota
CAA
Leu
>WENV170057630
CDZG01044642
662558
Verrucomicrobiota
GCC
Gly
>WENV170057635
CDZG01044679
662558
Verrucomicrobiota
GCC
Gly
>WENV170057224
CDZG01030317
784158
Verrucomicrobiota
TCC
Gly
>WENV170058041
CDZG01061318
663148
Verrucomicrobiota
CCT
Arg
>WENV170057648
CDZG01045137
663191
Verrucomicrobiota
TTG
Gln
>WENV170057776
CDZG01050567
155851
Verrucomicrobiota
GTA
Tyr
>WENV170058042
CDZG01061318
156064
Verrucomicrobiota
TAA
Leu
>WENV170056985
CDZG01021964
662766
Verrucomicrobiota
CTG
Gln
>WENV170058040
CDZG01061318
183416
Verrucomicrobiota
TAG
Leu
>WENV170057629
CDZG01044642
662760
Verrucomicrobiota
CAC
Val
>WENV170057638
CDZG01044679
469040
Verrucomicrobiota
CAT
Met
>WENV170058044
CDZG01061318
12844
Verrucomicrobiota
GCT
Ser
>WENV170057525
CDZG01041073
31527
Verrucomicrobiota
GGA
Ser
>WENV170057227
CDZG01030317
286765
Verrucomicrobiota
GGG
Pro
>WENV170057628
CDZG01044642
470563
Verrucomicrobiota
GGC
Ala
>WENV170057634
CDZG01044679
88820
Verrucomicrobiota
TGA
Ser
>WENV170057606
CDZG01043581
468989
Verrucomicrobiota
CTT
Lys
>WENV170057605
CDZG01043581
468989
Verrucomicrobiota
CTT
Lys
>WENV170057604
CDZG01043581
468989
Verrucomicrobiota
CTT
Lys
>WENV170056656
CDZG01010076
468989
Verrucomicrobiota
CTT
Lys
>WENV170056655
CDZG01010076
468989
Verrucomicrobiota
CTT
Lys
>WENV170056654
CDZG01010076
468989
Verrucomicrobiota
CTT
Lys
>WENV170057529
CDZG01041073
242669
Verrucomicrobiota
GTC
Asp
>WENV170056984
CDZG01021964
242669
Verrucomicrobiota
GTC
Asp
>WENV170056850
CDZG01017295
663166
Verrucomicrobiota
TGT
Thr
>WENV170057775
CDZG01050567
663168
Verrucomicrobiota
GTT
Asn
>WENV170057603
CDZG01043581
662761
Verrucomicrobiota
CGT
Thr
>WENV170056847
CDZG01017295
155855
Verrucomicrobiota
AAG
Leu
>WENV170057637
CDZG01044679
662758
Verrucomicrobiota
GTG
His
>WENV170058038
CDZG01061318
286784
Verrucomicrobiota
ACG
Arg
>WENV170056986
CDZG01021964
663178
Verrucomicrobiota
GAC
Val
>WENV170057113
CDZG01026197
12872
Verrucomicrobiota
CGA
Ser
>WENV170057636
CDZG01044679
470561
Verrucomicrobiota
TTC
Glu
>WENV170056849
CDZG01017295
470561
Verrucomicrobiota
TTC
Glu
>WENV170057526
CDZG01041073
469030
Verrucomicrobiota
TTT
Lys
>WENV170057527
CDZG01041073
286752
Verrucomicrobiota
TCT
Arg
>WENV170057226
CDZG01030317
285841
Verrucomicrobiota
TGG
Pro
>WENV170057225
CDZG01030317
469466
Verrucomicrobiota
GAA
Phe
>WENV170057602
CDZG01043581
286773
Verrucomicrobiota
CGG
Pro
>WENV170056983
CDZG01021964
663161
Verrucomicrobiota
TAC
Val
>WENV170057367
CDZG01035898
286760
Verrucomicrobiota
CAT
Met
>WENV170056848
CDZG01017295
662765
Verrucomicrobiota
GCA
Cys
>WENV170058053
CDZG01061823
662614
Verrucomicrobiota
GGT
Thr
>WENV170057639
CDZG01044679
663157
Verrucomicrobiota
CAT
Met
>WENV170057228
CDZG01030317
783783
Verrucomicrobiota
CCC
Gly
>WENV170057528
CDZG01041073
663193
Verrucomicrobiota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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