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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170058351
CDZH01005342
458652
Bacillota
GCC
Gly
>WENV170058760
CDZH01022700
458652
Bacillota
GCC
Gly
>WENV170058764
CDZH01022700
458652
Bacillota
GCC
Gly
>WENV170058212
CDZH01000712
275613
Bacillota
GTG
His
>WENV170058857
CDZH01025663
275613
Bacillota
GTG
His
>WENV170059475
CDZH01049416
455828
Bacillota
TAC
Val
>WENV170058495
CDZH01011277
282520
Bacillota
TCT
Arg
>WENV170059704
CDZH01057993
284731
Bacillota
GTC
Asp
>WENV170060194
CDZH01078062
465106
Bacillota
TGT
Thr
>WENV170059986
CDZH01069774
465106
Bacillota
TGT
Thr
>WENV170059897
CDZH01065561
465106
Bacillota
TGT
Thr
>WENV170058844
CDZH01025320
465106
Bacillota
TGT
Thr
>WENV170060299
CDZH01082673
285831
Bacillota
GTC
Asp
>WENV170058847
CDZH01025320
285831
Bacillota
GTC
Asp
>WENV170058522
CDZH01012609
285831
Bacillota
GTC
Asp
>WENV170059496
CDZH01050080
270426
Bacillota
GAT
Ile
>WENV170058631
CDZH01017994
270426
Bacillota
GAT
Ile
>WENV170058605
CDZH01016665
270426
Bacillota
GAT
Ile
>WENV170058488
CDZH01011148
270426
Bacillota
GAT
Ile
>WENV170058409
CDZH01007328
270426
Bacillota
GAT
Ile
>WENV170059302
CDZH01042342
451367
Bacillota
TAC
Val
>WENV170058841
CDZH01025319
451367
Bacillota
TAC
Val
>WENV170058818
CDZH01024651
451367
Bacillota
TAC
Val
>WENV170058801
CDZH01023989
451367
Bacillota
TAC
Val
>WENV170058761
CDZH01022700
451367
Bacillota
TAC
Val
>WENV170058757
CDZH01022700
451367
Bacillota
TAC
Val
>WENV170058350
CDZH01005342
451367
Bacillota
TAC
Val
>WENV170059585
CDZH01053936
451355
Bacillota
GAC
Val
>WENV170058727
CDZH01021445
72851
Bacillota
TGA
Ser
>WENV170058998
CDZH01030183
72851
Bacillota
TGA
Ser
>WENV170060119
CDZH01075189
270438
Bacillota
TCT
Arg
>WENV170059027
CDZH01030860
451352
Bacillota
GGT
Thr
>WENV170059978
CDZH01069148
275959
Bacillota
CAT
Met
>WENV170058995
CDZH01030101
275959
Bacillota
CAT
Met
>WENV170058725
CDZH01021444
275959
Bacillota
CAT
Met
>WENV170059216
CDZH01038473
112239
Bacillota
CAG
Leu
>WENV170059305
CDZH01042342
465093
Bacillota
GCC
Gly
>WENV170059865
CDZH01064639
779389
Bacillota
TCC
Gly
>WENV170059908
CDZH01065980
779389
Bacillota
TCC
Gly
>WENV170058856
CDZH01025663
275792
Bacillota
TCT
Arg
>WENV170059714
CDZH01058585
284661
Bacillota
CAT
Met
>WENV170059073
CDZH01032743
658733
Bacillota
GCC
Gly
>WENV170059962
CDZH01068540
274593
Bacillota
GAT
Ile
>WENV170060071
CDZH01073140
287917
Bacillota
GAT
Ile
>WENV170058619
CDZH01017284
287917
Bacillota
GAT
Ile
>WENV170059411
CDZH01046836
661891
Bacillota
GCC
Gly
>WENV170058560
CDZH01014678
661891
Bacillota
GCC
Gly
>WENV170059317
CDZH01042775
779385
Bacillota
CTG
Gln
>WENV170058769
CDZH01023263
451414
Bacillota
TGC
Ala
>WENV170060072
CDZH01073175
20504
Bacillota
GGA
Ser
>WENV170058843
CDZH01025319
451395
Bacillota
GAA
Phe
>WENV170058763
CDZH01022700
451395
Bacillota
GAA
Phe
>WENV170058759
CDZH01022700
451395
Bacillota
GAA
Phe
>WENV170058288
CDZH01003208
467075
Bacillota
TGC
Ala
>WENV170058268
CDZH01002490
467075
Bacillota
TGC
Ala
>WENV170060343
CDZH01084234
451375
Bacillota
GGC
Ala
>WENV170059944
CDZH01067710
451375
Bacillota
GGC
Ala
>WENV170059510
CDZH01050182
451375
Bacillota
GGC
Ala
>WENV170059390
CDZH01045757
451375
Bacillota
GGC
Ala
>WENV170058424
CDZH01008028
451375
Bacillota
GGC
Ala
>WENV170058341
CDZH01005289
451375
Bacillota
GGC
Ala
>WENV170058334
CDZH01004677
461574
Bacillota
TGT
Thr
>WENV170059961
CDZH01068540
461022
Bacillota
TGC
Ala
>WENV170060206
CDZH01079047
458649
Bacillota
GCC
Gly
>WENV170059942
CDZH01067387
458649
Bacillota
GCC
Gly
>WENV170060109
CDZH01074532
457194
Bacillota
TAC
Val
>WENV170059975
CDZH01069148
457194
Bacillota
TAC
Val
>WENV170058992
CDZH01030101
457194
Bacillota
TAC
Val
>WENV170058785
CDZH01023824
457194
Bacillota
TAC
Val
>WENV170059024
CDZH01030739
451334
Bacillota
TGT
Thr
>WENV170058839
CDZH01025319
451334
Bacillota
TGT
Thr
>WENV170058641
CDZH01018527
451334
Bacillota
TGT
Thr
>WENV170059607
CDZH01054709
780500
Bacillota
CCA
Trp
>WENV170059665
CDZH01056028
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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