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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170060095
CDZH01073896
86857
Bacteroidota
TAA
Leu
>WENV170060056
CDZH01072517
654879
Bacteroidota
GGT
Thr
>WENV170059806
CDZH01062102
780666
Bacteroidota
CTG
Gln
>WENV170059807
CDZH01062102
780666
Bacteroidota
CTG
Gln
>WENV170059808
CDZH01062102
780666
Bacteroidota
CTG
Gln
>WENV170058429
CDZH01008654
87218
Bacteroidota
TGA
Ser
>WENV170058583
CDZH01015723
281406
Bacteroidota
GGC
Ala
>WENV170060172
CDZH01077291
281406
Bacteroidota
GGC
Ala
>WENV170059146
CDZH01036006
270542
Bacteroidota
CAT
Met
>WENV170059145
CDZH01036006
270542
Bacteroidota
CAT
Met
>WENV170060227
CDZH01079876
270412
Bacteroidota
GTT
Asn
>WENV170060228
CDZH01079876
270412
Bacteroidota
GTT
Asn
>WENV170060229
CDZH01079876
270412
Bacteroidota
GTT
Asn
>WENV170059277
CDZH01041192
451354
Bacteroidota
TTT
Lys
>WENV170059622
CDZH01055542
658239
Bacteroidota
CTC
Glu
>WENV170060335
CDZH01083352
30311
Bacteroidota
GGA
Ser
>WENV170059935
CDZH01067217
87355
Bacteroidota
TGA
Ser
>WENV170058533
CDZH01013307
87355
Bacteroidota
TGA
Ser
>WENV170059352
CDZH01044321
30278
Bacteroidota
GGA
Ser
>WENV170058756
CDZH01022697
30278
Bacteroidota
GGA
Ser
>WENV170059798
CDZH01061919
218000
Bacteroidota
CAG
Leu
>WENV170059795
CDZH01061919
218000
Bacteroidota
CAG
Leu
>WENV170059792
CDZH01061919
218000
Bacteroidota
CAG
Leu
>WENV170058418
CDZH01007909
218000
Bacteroidota
CAG
Leu
>WENV170058472
CDZH01010084
270492
Bacteroidota
GTG
His
>WENV170059620
CDZH01055418
451360
Bacteroidota
CGT
Thr
>WENV170058525
CDZH01012616
153684
Bacteroidota
GTA
Tyr
>WENV170058209
CDZH01000650
783463
Bacteroidota
CTG
Gln
>WENV170058615
CDZH01017050
273124
Bacteroidota
GTC
Asp
>WENV170060010
CDZH01071029
273124
Bacteroidota
GTC
Asp
>WENV170058695
CDZH01019940
180313
Bacteroidota
TAG
Leu
>WENV170058639
CDZH01018215
270514
Bacteroidota
GTT
Asn
>WENV170059199
CDZH01037905
273900
Bacteroidota
GTC
Asp
>WENV170059198
CDZH01037905
273900
Bacteroidota
GTC
Asp
>WENV170058812
CDZH01024227
273900
Bacteroidota
GTC
Asp
>WENV170059014
CDZH01030731
179905
Bacteroidota
TAG
Leu
>WENV170059596
CDZH01054650
270418
Bacteroidota
GGC
Ala
>WENV170059284
CDZH01041746
656020
Bacteroidota
>WENV170058821
CDZH01024676
72680
Bacteroidota
TAA
Leu
>WENV170059737
CDZH01059261
240600
Bacteroidota
GGG
Pro
>WENV170059869
CDZH01064789
779393
Bacteroidota
TTG
Gln
>WENV170059530
CDZH01050831
779393
Bacteroidota
TTG
Gln
>WENV170059292
CDZH01042256
779393
Bacteroidota
TTG
Gln
>WENV170058466
CDZH01010060
779393
Bacteroidota
TTG
Gln
>WENV170058973
CDZH01029376
270494
Bacteroidota
CGG
Pro
>WENV170059668
CDZH01056091
782347
Bacteroidota
CTG
Gln
>WENV170058544
CDZH01013450
782347
Bacteroidota
CTG
Gln
>WENV170060153
CDZH01077082
270491
Bacteroidota
GGC
Ala
>WENV170060052
CDZH01072434
451484
Bacteroidota
CAT
Met
>WENV170059186
CDZH01037447
653343
Bacteroidota
CCT
Arg
>WENV170059084
CDZH01033239
653343
Bacteroidota
CCT
Arg
>WENV170060324
CDZH01083165
463028
Bacteroidota
CAT
Met
>WENV170060249
CDZH01080528
463028
Bacteroidota
CAT
Met
>WENV170059685
CDZH01057343
463028
Bacteroidota
CAT
Met
>WENV170059492
CDZH01049605
463028
Bacteroidota
CAT
Met
>WENV170058823
CDZH01024676
780665
Bacteroidota
TTG
Gln
>WENV170059256
CDZH01040544
270851
Bacteroidota
TCT
Arg
>WENV170059285
CDZH01041746
180504
Bacteroidota
CAA
Leu
>WENV170058405
CDZH01006714
653377
Bacteroidota
CTC
Glu
>WENV170059550
CDZH01051396
653350
Bacteroidota
GCA
Cys
>WENV170059483
CDZH01049438
653350
Bacteroidota
GCA
Cys
>WENV170060327
CDZH01083259
660260
Bacteroidota
CTC
Glu
>WENV170060326
CDZH01083259
660260
Bacteroidota
CTC
Glu
>WENV170060143
CDZH01076452
653342
Bacteroidota
CCG
Arg
>WENV170058517
CDZH01012092
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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