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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170060382
CDZI01002626
284706
Bacteroidota
GTT
Asn
>WENV170061947
CDZI01071062
284706
Bacteroidota
GTT
Asn
>WENV170061163
CDZI01036805
154983
Bacteroidota
GTA
Tyr
>WENV170060633
CDZI01012262
654879
Bacteroidota
GGT
Thr
>WENV170060841
CDZI01022318
654879
Bacteroidota
GGT
Thr
>WENV170061865
CDZI01068127
654879
Bacteroidota
GGT
Thr
>WENV170061006
CDZI01030463
780666
Bacteroidota
CTG
Gln
>WENV170061007
CDZI01030463
780666
Bacteroidota
CTG
Gln
>WENV170061008
CDZI01030463
780666
Bacteroidota
CTG
Gln
>WENV170061009
CDZI01030463
780666
Bacteroidota
CTG
Gln
>WENV170061010
CDZI01030463
780666
Bacteroidota
CTG
Gln
>WENV170061110
CDZI01034519
87218
Bacteroidota
TGA
Ser
>WENV170061900
CDZI01069483
87218
Bacteroidota
TGA
Ser
>WENV170061439
CDZI01049596
281406
Bacteroidota
GGC
Ala
>WENV170061343
CDZI01044574
281406
Bacteroidota
GGC
Ala
>WENV170060675
CDZI01013522
281406
Bacteroidota
GGC
Ala
>WENV170060418
CDZI01003864
281406
Bacteroidota
GGC
Ala
>WENV170061700
CDZI01060369
270542
Bacteroidota
CAT
Met
>WENV170060697
CDZI01014061
270542
Bacteroidota
CAT
Met
>WENV170061041
CDZI01031627
270412
Bacteroidota
GTT
Asn
>WENV170061040
CDZI01031627
270412
Bacteroidota
GTT
Asn
>WENV170061277
CDZI01041505
284758
Bacteroidota
GAT
Ile
>WENV170061664
CDZI01058669
87355
Bacteroidota
TGA
Ser
>WENV170061380
CDZI01046091
87355
Bacteroidota
TGA
Ser
>WENV170060862
CDZI01024027
87355
Bacteroidota
TGA
Ser
>WENV170060714
CDZI01014744
87355
Bacteroidota
TGA
Ser
>WENV170060376
CDZI01002202
30278
Bacteroidota
GGA
Ser
>WENV170060879
CDZI01024615
218000
Bacteroidota
CAG
Leu
>WENV170060400
CDZI01002861
270492
Bacteroidota
GTG
His
>WENV170061962
CDZI01072000
281318
Bacteroidota
GTT
Asn
>WENV170061753
CDZI01062878
451360
Bacteroidota
CGT
Thr
>WENV170061309
CDZI01042704
153684
Bacteroidota
GTA
Tyr
>WENV170061170
CDZI01036862
153684
Bacteroidota
GTA
Tyr
>WENV170061530
CDZI01053925
783463
Bacteroidota
CTG
Gln
>WENV170060609
CDZI01010418
783463
Bacteroidota
CTG
Gln
>WENV170060405
CDZI01003376
273124
Bacteroidota
GTC
Asp
>WENV170061329
CDZI01043947
273124
Bacteroidota
GTC
Asp
>WENV170061340
CDZI01044560
273124
Bacteroidota
GTC
Asp
>WENV170060403
CDZI01003228
270514
Bacteroidota
GTT
Asn
>WENV170061639
CDZI01057574
273900
Bacteroidota
GTC
Asp
>WENV170061638
CDZI01057574
273900
Bacteroidota
GTC
Asp
>WENV170061123
CDZI01035041
273900
Bacteroidota
GTC
Asp
>WENV170061122
CDZI01035041
273900
Bacteroidota
GTC
Asp
>WENV170061869
CDZI01068422
451389
Bacteroidota
GCC
Gly
>WENV170060485
CDZI01005627
179905
Bacteroidota
TAG
Leu
>WENV170061034
CDZI01031273
270418
Bacteroidota
GGC
Ala
>WENV170062034
CDZI01075192
656020
Bacteroidota
>WENV170061538
CDZI01053934
72680
Bacteroidota
TAA
Leu
>WENV170061229
CDZI01040255
72680
Bacteroidota
TAA
Leu
>WENV170060471
CDZI01004634
240600
Bacteroidota
GGG
Pro
>WENV170061827
CDZI01065904
779393
Bacteroidota
TTG
Gln
>WENV170061751
CDZI01062875
779393
Bacteroidota
TTG
Gln
>WENV170060873
CDZI01024445
779393
Bacteroidota
TTG
Gln
>WENV170061732
CDZI01061479
270494
Bacteroidota
CGG
Pro
>WENV170061449
CDZI01050136
270494
Bacteroidota
CGG
Pro
>WENV170061372
CDZI01045579
270494
Bacteroidota
CGG
Pro
>WENV170061018
CDZI01030473
782347
Bacteroidota
CTG
Gln
>WENV170061301
CDZI01042117
274353
Bacteroidota
CAT
Met
>WENV170060654
CDZI01012889
270491
Bacteroidota
GGC
Ala
>WENV170060526
CDZI01006891
451484
Bacteroidota
CAT
Met
>WENV170060885
CDZI01024762
451484
Bacteroidota
CAT
Met
>WENV170060868
CDZI01024155
653343
Bacteroidota
CCT
Arg
>WENV170060645
CDZI01012774
466831
Bacteroidota
GCC
Gly
>WENV170060578
CDZI01009280
463028
Bacteroidota
CAT
Met
>WENV170061119
CDZI01035034
463028
Bacteroidota
CAT
Met
>WENV170061686
CDZI01059238
463028
Bacteroidota
CAT
Met
>WENV170060473
CDZI01005012
653774
Bacteroidota
CAT
Met
>WENV170061194
CDZI01038219
153692
Bacteroidota
GTA
Tyr
>WENV170061231
CDZI01040255
780665
Bacteroidota
TTG
Gln
>WENV170061401
CDZI01047308
270851
Bacteroidota
TCT
Arg
>WENV170060912
CDZI01025567
180504
Bacteroidota
CAA
Leu
>WENV170061866
CDZI01068127
456408
Bacteroidota
CCA
Trp
>WENV170060534
CDZI01007103
653350
Bacteroidota
GCA
Cys
>WENV170061610
CDZI01056393
653350
Bacteroidota
GCA
Cys
>WENV170061847
CDZI01066963
780581
Bacteroidota
TTG
Gln
>WENV170061399
CDZI01046747
660260
Bacteroidota
CTC
Glu
>WENV170061858
CDZI01067557
653342
Bacteroidota
CCG
Arg
>WENV170061260
CDZI01040894
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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