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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170062145
CDZJ01003815
270416
Bacillota
CAC
Val
>WENV170062830
CDZJ01028393
270416
Bacillota
CAC
Val
>WENV170062418
CDZJ01013309
467910
Bacillota
TGC
Ala
>WENV170062576
CDZJ01020320
465106
Bacillota
TGT
Thr
>WENV170062864
CDZJ01029795
465106
Bacillota
TGT
Thr
>WENV170062038
CDZJ01000240
285831
Bacillota
GTC
Asp
>WENV170062322
CDZJ01009381
285831
Bacillota
GTC
Asp
>WENV170062575
CDZJ01020319
460662
Bacillota
GCC
Gly
>WENV170062633
CDZJ01021994
460662
Bacillota
GCC
Gly
>WENV170062795
CDZJ01027049
460662
Bacillota
GCC
Gly
>WENV170062836
CDZJ01028763
460662
Bacillota
GCC
Gly
>WENV170062721
CDZJ01024142
270426
Bacillota
GAT
Ile
>WENV170062357
CDZJ01010824
451355
Bacillota
GAC
Val
>WENV170062417
CDZJ01013309
279224
Bacillota
GAT
Ile
>WENV170062150
CDZJ01004006
279224
Bacillota
GAT
Ile
>WENV170062083
CDZJ01001734
279224
Bacillota
GAT
Ile
>WENV170062926
CDZJ01031156
468336
Bacillota
GCC
Gly
>WENV170062324
CDZJ01009381
468336
Bacillota
GCC
Gly
>WENV170062720
CDZJ01024142
467963
Bacillota
TGC
Ala
>WENV170062569
CDZJ01020131
88702
Bacillota
CAG
Leu
>WENV170062568
CDZJ01020131
88702
Bacillota
CAG
Leu
>WENV170062567
CDZJ01020131
88702
Bacillota
CAG
Leu
>WENV170062109
CDZJ01002922
88702
Bacillota
CAG
Leu
>WENV170062195
CDZJ01005210
72992
Bacillota
TAA
Leu
>WENV170062801
CDZJ01027294
466773
Bacillota
GGC
Ala
>WENV170062779
CDZJ01026701
451375
Bacillota
GGC
Ala
>WENV170062761
CDZJ01025751
451375
Bacillota
GGC
Ala
>WENV170062537
CDZJ01018594
451375
Bacillota
GGC
Ala
>WENV170062530
CDZJ01018089
451375
Bacillota
GGC
Ala
>WENV170062292
CDZJ01008407
451375
Bacillota
GGC
Ala
>WENV170062291
CDZJ01008407
451375
Bacillota
GGC
Ala
>WENV170062102
CDZJ01002474
451375
Bacillota
GGC
Ala
>WENV170062168
CDZJ01004728
270405
Bacillota
ACG
Arg
>WENV170062144
CDZJ01003785
454988
Bacillota
TGC
Ala
>WENV170062593
CDZJ01020836
658259
Bacillota
CTC
Glu
>WENV170062441
CDZJ01014447
658259
Bacillota
CTC
Glu
>WENV170062348
CDZJ01010441
658259
Bacillota
CTC
Glu
>WENV170062540
CDZJ01018804
285826
Bacillota
CAT
Met
>WENV170062484
CDZJ01016279
285826
Bacillota
CAT
Met
>WENV170062339
CDZJ01009967
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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