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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170062579
CDZJ01020323
86857
Bacteroidota
TAA
Leu
>WENV170062312
CDZJ01008700
779477
Bacteroidota
TTG
Gln
>WENV170062666
CDZJ01023382
270542
Bacteroidota
CAT
Met
>WENV170062667
CDZJ01023382
270542
Bacteroidota
CAT
Met
>WENV170062149
CDZJ01003922
270412
Bacteroidota
GTT
Asn
>WENV170062607
CDZJ01021559
270412
Bacteroidota
GTT
Asn
>WENV170062608
CDZJ01021559
270412
Bacteroidota
GTT
Asn
>WENV170062224
CDZJ01005772
451354
Bacteroidota
TTT
Lys
>WENV170062319
CDZJ01009313
451354
Bacteroidota
TTT
Lys
>WENV170062759
CDZJ01025749
451354
Bacteroidota
TTT
Lys
>WENV170062838
CDZJ01028765
451354
Bacteroidota
TTT
Lys
>WENV170062845
CDZJ01028966
451354
Bacteroidota
TTT
Lys
>WENV170062930
CDZJ01031604
451354
Bacteroidota
TTT
Lys
>WENV170062548
CDZJ01019100
654770
Bacteroidota
GGT
Thr
>WENV170062545
CDZJ01019099
458130
Bacteroidota
TTT
Lys
>WENV170062141
CDZJ01003718
653389
Bacteroidota
GGT
Thr
>WENV170062735
CDZJ01024755
30311
Bacteroidota
GGA
Ser
>WENV170062510
CDZJ01017106
87355
Bacteroidota
TGA
Ser
>WENV170062480
CDZJ01016038
87355
Bacteroidota
TGA
Ser
>WENV170062507
CDZJ01016929
779381
Bacteroidota
CTG
Gln
>WENV170062815
CDZJ01027814
30278
Bacteroidota
GGA
Ser
>WENV170062860
CDZJ01029645
218000
Bacteroidota
CAG
Leu
>WENV170062857
CDZJ01029645
218000
Bacteroidota
CAG
Leu
>WENV170062615
CDZJ01021656
270492
Bacteroidota
GTG
His
>WENV170062523
CDZJ01017751
451360
Bacteroidota
CGT
Thr
>WENV170062439
CDZJ01014434
458644
Bacteroidota
CCC
Gly
>WENV170062774
CDZJ01026230
153684
Bacteroidota
GTA
Tyr
>WENV170062746
CDZJ01025048
153684
Bacteroidota
GTA
Tyr
>WENV170062481
CDZJ01016039
153684
Bacteroidota
GTA
Tyr
>WENV170062333
CDZJ01009664
180313
Bacteroidota
TAG
Leu
>WENV170062511
CDZJ01017106
86859
Bacteroidota
TGA
Ser
>WENV170062411
CDZJ01013060
86859
Bacteroidota
TGA
Ser
>WENV170062659
CDZJ01022871
270514
Bacteroidota
GTT
Asn
>WENV170062658
CDZJ01022871
270514
Bacteroidota
GTT
Asn
>WENV170062657
CDZJ01022871
270514
Bacteroidota
GTT
Asn
>WENV170062651
CDZJ01022590
270514
Bacteroidota
GTT
Asn
>WENV170062650
CDZJ01022590
270514
Bacteroidota
GTT
Asn
>WENV170062649
CDZJ01022590
270514
Bacteroidota
GTT
Asn
>WENV170062555
CDZJ01019100
451389
Bacteroidota
GCC
Gly
>WENV170062553
CDZJ01019100
451389
Bacteroidota
GCC
Gly
>WENV170062349
CDZJ01010462
451389
Bacteroidota
GCC
Gly
>WENV170062587
CDZJ01020625
179905
Bacteroidota
TAG
Leu
>WENV170062736
CDZJ01024759
270418
Bacteroidota
GGC
Ala
>WENV170062405
CDZJ01012656
277204
Bacteroidota
GTC
Asp
>WENV170062275
CDZJ01007892
277204
Bacteroidota
GTC
Asp
>WENV170062126
CDZJ01003159
240600
Bacteroidota
GGG
Pro
>WENV170062223
CDZJ01005772
240600
Bacteroidota
GGG
Pro
>WENV170062581
CDZJ01020337
240600
Bacteroidota
GGG
Pro
>WENV170062839
CDZJ01028766
779393
Bacteroidota
TTG
Gln
>WENV170062734
CDZJ01024752
779393
Bacteroidota
TTG
Gln
>WENV170062216
CDZJ01005731
779393
Bacteroidota
TTG
Gln
>WENV170062763
CDZJ01025912
270494
Bacteroidota
CGG
Pro
>WENV170062739
CDZJ01024823
782347
Bacteroidota
CTG
Gln
>WENV170062110
CDZJ01002935
270491
Bacteroidota
GGC
Ala
>WENV170062522
CDZJ01017596
241460
Bacteroidota
TAC
Val
>WENV170062521
CDZJ01017596
241460
Bacteroidota
TAC
Val
>WENV170062285
CDZJ01008101
451484
Bacteroidota
CAT
Met
>WENV170062280
CDZJ01008100
451484
Bacteroidota
CAT
Met
>WENV170062094
CDZJ01002061
451484
Bacteroidota
CAT
Met
>WENV170062656
CDZJ01022815
653343
Bacteroidota
CCT
Arg
>WENV170062620
CDZJ01021886
653343
Bacteroidota
CCT
Arg
>WENV170062477
CDZJ01015978
653343
Bacteroidota
CCT
Arg
>WENV170062549
CDZJ01019100
30567
Bacteroidota
GGA
Ser
>WENV170062088
CDZJ01001941
653774
Bacteroidota
CAT
Met
>WENV170062438
CDZJ01014434
653774
Bacteroidota
CAT
Met
>WENV170062409
CDZJ01012775
153692
Bacteroidota
GTA
Tyr
>WENV170062248
CDZJ01006608
153692
Bacteroidota
GTA
Tyr
>WENV170062274
CDZJ01007892
153692
Bacteroidota
GTA
Tyr
>WENV170062609
CDZJ01021566
30277
Bacteroidota
GGA
Ser
>WENV170062755
CDZJ01025749
30277
Bacteroidota
GGA
Ser
>WENV170062073
CDZJ01001573
653377
Bacteroidota
CTC
Glu
>WENV170062599
CDZJ01021318
653350
Bacteroidota
GCA
Cys
>WENV170062479
CDZJ01016015
653350
Bacteroidota
GCA
Cys
>WENV170062308
CDZJ01008651
653350
Bacteroidota
GCA
Cys
>WENV170062244
CDZJ01006553
653350
Bacteroidota
GCA
Cys
>WENV170062035
CDZJ01000236
653350
Bacteroidota
GCA
Cys
>WENV170062266
CDZJ01007650
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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